Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND1P03886 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
MT-ND1P03886 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.61■□□□□ 0.09
MT-ND1P03886 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.61■□□□□ 0.09
MT-ND1P03886 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND1P03886 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND1P03886 AL020989.1-201ENST00000422979 469 ntBASIC15.61■□□□□ 0.09
MT-ND1P03886 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.61■□□□□ 0.09
MT-ND1P03886 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
MT-ND1P03886 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND1P03886 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.61■□□□□ 0.09
MT-ND1P03886 AC069148.1-201ENST00000608741 768 ntBASIC15.61■□□□□ 0.09
MT-ND1P03886 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.61■□□□□ 0.09
MT-ND1P03886 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.61■□□□□ 0.09
MT-ND1P03886 AP000867.4-201ENST00000641616 219 ntBASIC15.61■□□□□ 0.09
MT-ND1P03886 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
MT-ND1P03886 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND1P03886 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND1P03886 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND1P03886 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.61■□□□□ 0.09
MT-ND1P03886 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.61■□□□□ 0.09
MT-ND1P03886 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND1P03886 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND1P03886 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND1P03886 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND1P03886 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.61■□□□□ 0.09
MT-ND1P03886 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
MT-ND1P03886 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND1P03886 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.61■□□□□ 0.09
MT-ND1P03886 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
MT-ND1P03886 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.6■□□□□ 0.09
MT-ND1P03886 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
MT-ND1P03886 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.6■□□□□ 0.09
MT-ND1P03886 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.6■□□□□ 0.09
MT-ND1P03886 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
MT-ND1P03886 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND1P03886 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND1P03886 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.6■□□□□ 0.09
MT-ND1P03886 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.6■□□□□ 0.09
MT-ND1P03886 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND1P03886 FLJ16779-201ENST00000612722 7638 ntBASIC15.6■□□□□ 0.09
MT-ND1P03886 PPT1-215ENST00000641471 2368 ntBASIC15.6■□□□□ 0.09
MT-ND1P03886 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND1P03886 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.6■□□□□ 0.09
MT-ND1P03886 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND1P03886 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND1P03886 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND1P03886 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
MT-ND1P03886 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND1P03886 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
MT-ND1P03886 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
MT-ND1P03886 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.6■□□□□ 0.09
MT-ND1P03886 LINC00982-205ENST00000420957 435 ntBASIC15.6■□□□□ 0.09
MT-ND1P03886 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.6■□□□□ 0.09
MT-ND1P03886 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.6■□□□□ 0.09
MT-ND1P03886 AP000867.3-201ENST00000524675 377 ntBASIC15.6■□□□□ 0.09
MT-ND1P03886 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.6■□□□□ 0.09
MT-ND1P03886 AC012615.1-201ENST00000565797 1299 ntBASIC15.6■□□□□ 0.09
MT-ND1P03886 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.6■□□□□ 0.09
MT-ND1P03886 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND1P03886 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND1P03886 NPAP1P7-201ENST00000613027 823 ntBASIC15.6■□□□□ 0.09
MT-ND1P03886 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.6■□□□□ 0.09
MT-ND1P03886 AL139011.1-202ENST00000642063 584 ntBASIC15.6■□□□□ 0.09
MT-ND1P03886 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND1P03886 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.6■□□□□ 0.09
MT-ND1P03886 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND1P03886 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND1P03886 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND1P03886 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND1P03886 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND1P03886 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.6■□□□□ 0.09
MT-ND1P03886 AL356309.3-201ENST00000624132 1934 ntBASIC15.6■□□□□ 0.09
MT-ND1P03886 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND1P03886 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND1P03886 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND1P03886 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
MT-ND1P03886 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND1P03886 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND1P03886 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND1P03886 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND1P03886 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND1P03886 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND1P03886 LINC02447-202ENST00000501888 2146 ntBASIC15.59■□□□□ 0.09
MT-ND1P03886 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
MT-ND1P03886 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND1P03886 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND1P03886 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
MT-ND1P03886 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND1P03886 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND1P03886 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND1P03886 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
MT-ND1P03886 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND1P03886 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.59■□□□□ 0.09
MT-ND1P03886 SPDYE21P-201ENST00000413323 827 ntBASIC15.59■□□□□ 0.09
MT-ND1P03886 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.59■□□□□ 0.09
MT-ND1P03886 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.59■□□□□ 0.09
MT-ND1P03886 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.59■□□□□ 0.09
MT-ND1P03886 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.59■□□□□ 0.09
MT-ND1P03886 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms