Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DRAP01903 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DRAP01903 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DRAP01903 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DRAP01903 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HLA-DRAP01903 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
HLA-DRAP01903 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DRAP01903 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DRAP01903 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
HLA-DRAP01903 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DRAP01903 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HLA-DRAP01903 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DRAP01903 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DRAP01903 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DRAP01903 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DRAP01903 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
HLA-DRAP01903 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DRAP01903 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
HLA-DRAP01903 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DRAP01903 KRT18P13-201ENST00000400056 1290 ntBASIC17.68■□□□□ 0.42
HLA-DRAP01903 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.68■□□□□ 0.42
HLA-DRAP01903 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.68■□□□□ 0.42
HLA-DRAP01903 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.68■□□□□ 0.42
HLA-DRAP01903 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.68■□□□□ 0.42
HLA-DRAP01903 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.68■□□□□ 0.42
HLA-DRAP01903 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DRAP01903 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.68■□□□□ 0.42
HLA-DRAP01903 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.68■□□□□ 0.42
HLA-DRAP01903 AC073389.1-201ENST00000595595 795 ntBASIC17.68■□□□□ 0.42
HLA-DRAP01903 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.68■□□□□ 0.42
HLA-DRAP01903 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.68■□□□□ 0.42
HLA-DRAP01903 AC023511.2-201ENST00000618803 211 ntBASIC17.68■□□□□ 0.42
HLA-DRAP01903 AC008267.7-201ENST00000624570 1194 ntBASIC17.68■□□□□ 0.42
HLA-DRAP01903 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.68■□□□□ 0.42
HLA-DRAP01903 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.68■□□□□ 0.42
HLA-DRAP01903 AC105339.1-204ENST00000636249 355 ntBASIC17.68■□□□□ 0.42
HLA-DRAP01903 MTHFR-217ENST00000641820 1569 ntBASIC17.68■□□□□ 0.42
HLA-DRAP01903 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.68■□□□□ 0.42
HLA-DRAP01903 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DRAP01903 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.68■□□□□ 0.42
HLA-DRAP01903 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DRAP01903 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DRAP01903 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DRAP01903 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DRAP01903 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DRAP01903 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HLA-DRAP01903 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DRAP01903 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DRAP01903 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DRAP01903 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DRAP01903 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DRAP01903 AC006449.6-201ENST00000612330 2296 ntBASIC17.67■□□□□ 0.42
HLA-DRAP01903 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DRAP01903 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DRAP01903 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 LINC01225-203ENST00000563550 1244 ntBASIC17.67■□□□□ 0.42
HLA-DRAP01903 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 AC022145.2-201ENST00000598203 171 ntBASIC17.67■□□□□ 0.42
HLA-DRAP01903 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DRAP01903 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DRAP01903 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DRAP01903 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DRAP01903 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DRAP01903 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 U82695.1-201ENST00000635752 1889 ntBASIC17.67■□□□□ 0.42
HLA-DRAP01903 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DRAP01903 AL592424.1-201ENST00000563624 1536 ntBASIC17.67■□□□□ 0.42
HLA-DRAP01903 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
HLA-DRAP01903 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
HLA-DRAP01903 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HLA-DRAP01903 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DRAP01903 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DRAP01903 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DRAP01903 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.66■□□□□ 0.42
HLA-DRAP01903 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DRAP01903 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
HLA-DRAP01903 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DRAP01903 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
HLA-DRAP01903 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms