Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.63■□□□□ 0.09
CLPTM1O96005 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLPTM1O96005 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLPTM1O96005 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLPTM1O96005 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.63■□□□□ 0.09
CLPTM1O96005 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLPTM1O96005 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.63■□□□□ 0.09
CLPTM1O96005 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLPTM1O96005 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLPTM1O96005 AC011498.5-201ENST00000592027 486 ntBASIC15.63■□□□□ 0.09
CLPTM1O96005 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CLPTM1O96005 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.63■□□□□ 0.09
CLPTM1O96005 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLPTM1O96005 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLPTM1O96005 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.63■□□□□ 0.09
CLPTM1O96005 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.63■□□□□ 0.09
CLPTM1O96005 AC007292.2-201ENST00000593524 1812 ntBASIC15.63■□□□□ 0.09
CLPTM1O96005 AC006486.2-201ENST00000624246 2199 ntBASIC15.63■□□□□ 0.09
CLPTM1O96005 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.63■□□□□ 0.09
CLPTM1O96005 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLPTM1O96005 CICP24-201ENST00000605464 2705 ntBASIC15.63■□□□□ 0.09
CLPTM1O96005 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLPTM1O96005 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
CLPTM1O96005 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLPTM1O96005 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLPTM1O96005 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLPTM1O96005 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.63■□□□□ 0.09
CLPTM1O96005 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.62■□□□□ 0.09
CLPTM1O96005 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.62■□□□□ 0.09
CLPTM1O96005 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.62■□□□□ 0.09
CLPTM1O96005 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 Z83836.1-201ENST00000624605 1642 ntBASIC15.62■□□□□ 0.09
CLPTM1O96005 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CLPTM1O96005 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.62■□□□□ 0.09
CLPTM1O96005 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.62■□□□□ 0.09
CLPTM1O96005 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
CLPTM1O96005 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.62■□□□□ 0.09
CLPTM1O96005 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.62■□□□□ 0.09
CLPTM1O96005 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CLPTM1O96005 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.62■□□□□ 0.09
CLPTM1O96005 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.62■□□□□ 0.09
CLPTM1O96005 AC005332.3-201ENST00000589904 676 ntBASIC15.62■□□□□ 0.09
CLPTM1O96005 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.62■□□□□ 0.09
CLPTM1O96005 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CLPTM1O96005 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.62■□□□□ 0.09
CLPTM1O96005 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CLPTM1O96005 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.62■□□□□ 0.09
CLPTM1O96005 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CLPTM1O96005 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CLPTM1O96005 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.62■□□□□ 0.09
CLPTM1O96005 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLPTM1O96005 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CLPTM1O96005 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CLPTM1O96005 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
CLPTM1O96005 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CLPTM1O96005 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLPTM1O96005 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLPTM1O96005 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CLPTM1O96005 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLPTM1O96005 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLPTM1O96005 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLPTM1O96005 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLPTM1O96005 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLPTM1O96005 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLPTM1O96005 TSPY22P-201ENST00000427496 604 ntBASIC15.61■□□□□ 0.09
CLPTM1O96005 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CLPTM1O96005 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.61■□□□□ 0.09
CLPTM1O96005 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLPTM1O96005 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
CLPTM1O96005 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.61■□□□□ 0.09
CLPTM1O96005 AC093458.2-201ENST00000623150 629 ntBASIC15.61■□□□□ 0.09
CLPTM1O96005 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.61■□□□□ 0.09
CLPTM1O96005 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLPTM1O96005 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLPTM1O96005 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.61■□□□□ 0.09
CLPTM1O96005 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.61■□□□□ 0.09
CLPTM1O96005 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms