Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.92■□□□□ 0.62
MBD3O95983 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.92■□□□□ 0.62
MBD3O95983 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.92■□□□□ 0.62
MBD3O95983 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 AC063952.2-201ENST00000498792 1227 ntBASIC18.92■□□□□ 0.62
MBD3O95983 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 CYP2A7P1-201ENST00000595391 815 ntBASIC18.92■□□□□ 0.62
MBD3O95983 Z69720.1-201ENST00000601483 472 ntBASIC18.92■□□□□ 0.62
MBD3O95983 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
MBD3O95983 AC114341.1-201ENST00000618070 349 ntBASIC18.92■□□□□ 0.62
MBD3O95983 REXO1L3P-201ENST00000622202 1288 ntBASIC18.92■□□□□ 0.62
MBD3O95983 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.92■□□□□ 0.62
MBD3O95983 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 AC136621.1-201ENST00000624017 2304 ntBASIC18.92■□□□□ 0.62
MBD3O95983 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.92■□□□□ 0.62
MBD3O95983 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
MBD3O95983 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
MBD3O95983 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
MBD3O95983 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.92■□□□□ 0.62
MBD3O95983 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.92■□□□□ 0.62
MBD3O95983 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3O95983 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
MBD3O95983 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.91■□□□□ 0.62
MBD3O95983 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3O95983 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
MBD3O95983 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3O95983 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3O95983 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
MBD3O95983 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
MBD3O95983 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3O95983 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.91■□□□□ 0.62
MBD3O95983 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
MBD3O95983 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
MBD3O95983 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.91■□□□□ 0.62
MBD3O95983 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.91■□□□□ 0.62
MBD3O95983 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.91■□□□□ 0.62
MBD3O95983 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.91■□□□□ 0.62
MBD3O95983 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
MBD3O95983 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
MBD3O95983 AC097493.4-201ENST00000641197 219 ntBASIC18.91■□□□□ 0.62
MBD3O95983 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
MBD3O95983 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3O95983 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.91■□□□□ 0.62
MBD3O95983 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
MBD3O95983 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
MBD3O95983 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3O95983 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
MBD3O95983 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3O95983 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
MBD3O95983 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3O95983 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3O95983 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.91■□□□□ 0.62
MBD3O95983 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3O95983 AL109954.1-202ENST00000564051 2148 ntBASIC18.91■□□□□ 0.62
MBD3O95983 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
MBD3O95983 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3O95983 NCF1C-201ENST00000438382 1427 ntBASIC18.91■□□□□ 0.62
MBD3O95983 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.91■□□□□ 0.62
MBD3O95983 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3O95983 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3O95983 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3O95983 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.9■□□□□ 0.62
MBD3O95983 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3O95983 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
MBD3O95983 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
MBD3O95983 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.9■□□□□ 0.62
MBD3O95983 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3O95983 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.9■□□□□ 0.62
MBD3O95983 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3O95983 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
MBD3O95983 KRT18P57-201ENST00000443599 1254 ntBASIC18.9■□□□□ 0.62
MBD3O95983 AL136038.3-201ENST00000561909 1096 ntBASIC18.9■□□□□ 0.62
MBD3O95983 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.9■□□□□ 0.62
MBD3O95983 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.9■□□□□ 0.62
MBD3O95983 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.9■□□□□ 0.62
MBD3O95983 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3O95983 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
MBD3O95983 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3O95983 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3O95983 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
MBD3O95983 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3O95983 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3O95983 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3O95983 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.9■□□□□ 0.62
MBD3O95983 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3O95983 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms