Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX2-2O95096 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX2-2O95096 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NKX2-2O95096 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NKX2-2O95096 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX2-2O95096 YBX2P1-201ENST00000394192 760 ntBASIC15.17■□□□□ 0.02
NKX2-2O95096 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.17■□□□□ 0.02
NKX2-2O95096 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX2-2O95096 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX2-2O95096 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX2-2O95096 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX2-2O95096 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX2-2O95096 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.17■□□□□ 0.02
NKX2-2O95096 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
NKX2-2O95096 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX2-2O95096 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX2-2O95096 AL135744.1-201ENST00000565098 629 ntBASIC15.17■□□□□ 0.02
NKX2-2O95096 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.17■□□□□ 0.02
NKX2-2O95096 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NKX2-2O95096 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
NKX2-2O95096 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NKX2-2O95096 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NKX2-2O95096 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX2-2O95096 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX2-2O95096 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
NKX2-2O95096 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
NKX2-2O95096 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NKX2-2O95096 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NKX2-2O95096 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX2-2O95096 AL589702.1-201ENST00000641229 1509 ntBASIC15.17■□□□□ 0.02
NKX2-2O95096 AC018695.7-201ENST00000624587 2492 ntBASIC15.17■□□□□ 0.02
NKX2-2O95096 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX2-2O95096 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NKX2-2O95096 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NKX2-2O95096 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
NKX2-2O95096 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NKX2-2O95096 MIR648-201ENST00000385046 94 ntBASIC15.16■□□□□ 0.02
NKX2-2O95096 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.16■□□□□ 0.02
NKX2-2O95096 AL138918.1-201ENST00000568306 659 ntBASIC15.16■□□□□ 0.02
NKX2-2O95096 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.16■□□□□ 0.02
NKX2-2O95096 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.16■□□□□ 0.02
NKX2-2O95096 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.16■□□□□ 0.02
NKX2-2O95096 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
NKX2-2O95096 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NKX2-2O95096 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX2-2O95096 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
NKX2-2O95096 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.15■□□□□ 0.02
NKX2-2O95096 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
NKX2-2O95096 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.15■□□□□ 0.02
NKX2-2O95096 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NKX2-2O95096 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.15■□□□□ 0.02
NKX2-2O95096 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NKX2-2O95096 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NKX2-2O95096 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
NKX2-2O95096 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
NKX2-2O95096 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
NKX2-2O95096 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NKX2-2O95096 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.15■□□□□ 0.02
NKX2-2O95096 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.15■□□□□ 0.02
NKX2-2O95096 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms