Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.66■□□□□ 0.26
PRAMEF11O60813 MTHFR-217ENST00000641820 1569 ntBASIC16.66■□□□□ 0.26
PRAMEF11O60813 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.66■□□□□ 0.26
PRAMEF11O60813 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF11O60813 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF11O60813 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF11O60813 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF11O60813 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF11O60813 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PRAMEF11O60813 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF11O60813 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF11O60813 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PRAMEF11O60813 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF11O60813 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF11O60813 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF11O60813 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.66■□□□□ 0.26
PRAMEF11O60813 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PRAMEF11O60813 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF11O60813 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.66■□□□□ 0.26
PRAMEF11O60813 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PRAMEF11O60813 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF11O60813 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.66■□□□□ 0.26
PRAMEF11O60813 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF11O60813 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PRAMEF11O60813 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
PRAMEF11O60813 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF11O60813 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PRAMEF11O60813 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.65■□□□□ 0.26
PRAMEF11O60813 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.65■□□□□ 0.26
PRAMEF11O60813 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF11O60813 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF11O60813 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
PRAMEF11O60813 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF11O60813 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF11O60813 AC006449.6-201ENST00000612330 2296 ntBASIC16.65■□□□□ 0.26
PRAMEF11O60813 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PRAMEF11O60813 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PRAMEF11O60813 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.65■□□□□ 0.26
PRAMEF11O60813 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.65■□□□□ 0.26
PRAMEF11O60813 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF11O60813 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.65■□□□□ 0.26
PRAMEF11O60813 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.65■□□□□ 0.26
PRAMEF11O60813 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.65■□□□□ 0.26
PRAMEF11O60813 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.65■□□□□ 0.26
PRAMEF11O60813 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.65■□□□□ 0.26
PRAMEF11O60813 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF11O60813 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.65■□□□□ 0.26
PRAMEF11O60813 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.65■□□□□ 0.26
PRAMEF11O60813 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.65■□□□□ 0.26
PRAMEF11O60813 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PRAMEF11O60813 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.65■□□□□ 0.26
PRAMEF11O60813 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF11O60813 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF11O60813 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF11O60813 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.65■□□□□ 0.26
PRAMEF11O60813 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.65■□□□□ 0.26
PRAMEF11O60813 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF11O60813 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
PRAMEF11O60813 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
PRAMEF11O60813 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PRAMEF11O60813 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
PRAMEF11O60813 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF11O60813 AP3S2-216ENST00000617003 1561 ntBASIC16.64■□□□□ 0.25
PRAMEF11O60813 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF11O60813 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF11O60813 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PRAMEF11O60813 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.64■□□□□ 0.25
PRAMEF11O60813 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.64■□□□□ 0.25
PRAMEF11O60813 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF11O60813 HLA-H-201ENST00000383620 1096 ntBASIC16.64■□□□□ 0.25
PRAMEF11O60813 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.64■□□□□ 0.25
PRAMEF11O60813 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.64■□□□□ 0.25
PRAMEF11O60813 RBPMS2P1-201ENST00000437762 623 ntBASIC16.64■□□□□ 0.25
PRAMEF11O60813 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF11O60813 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.64■□□□□ 0.25
PRAMEF11O60813 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF11O60813 ALG1L8P-201ENST00000533887 760 ntBASIC16.64■□□□□ 0.25
PRAMEF11O60813 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.64■□□□□ 0.25
PRAMEF11O60813 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.64■□□□□ 0.25
PRAMEF11O60813 AL365330.1-201ENST00000607459 531 ntBASIC16.64■□□□□ 0.25
PRAMEF11O60813 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.64■□□□□ 0.25
PRAMEF11O60813 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PRAMEF11O60813 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.64■□□□□ 0.25
PRAMEF11O60813 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.64■□□□□ 0.25
PRAMEF11O60813 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF11O60813 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PRAMEF11O60813 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
PRAMEF11O60813 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.64■□□□□ 0.25
PRAMEF11O60813 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF11O60813 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF11O60813 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PRAMEF11O60813 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF11O60813 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PRAMEF11O60813 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF11O60813 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF11O60813 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF11O60813 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF11O60813 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF11O60813 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.63■□□□□ 0.25
PRAMEF11O60813 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms