Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CHD1O14646 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CHD1O14646 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC26■■□□□ 1.75
CHD1O14646 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC26■■□□□ 1.75
CHD1O14646 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC26■■□□□ 1.75
CHD1O14646 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CHD1O14646 MIR769-201ENST00000390225 118 ntBASIC26■■□□□ 1.75
CHD1O14646 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC26■■□□□ 1.75
CHD1O14646 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC26■■□□□ 1.75
CHD1O14646 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC26■■□□□ 1.75
CHD1O14646 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC26■■□□□ 1.75
CHD1O14646 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC26■■□□□ 1.75
CHD1O14646 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
CHD1O14646 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CHD1O14646 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC26■■□□□ 1.75
CHD1O14646 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC26■■□□□ 1.75
CHD1O14646 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
CHD1O14646 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CHD1O14646 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC26■■□□□ 1.75
CHD1O14646 AC015818.8-201ENST00000587907 1519 ntBASIC26■■□□□ 1.75
CHD1O14646 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CHD1O14646 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CHD1O14646 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
CHD1O14646 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC26■■□□□ 1.75
CHD1O14646 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC26■■□□□ 1.75
CHD1O14646 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC26■■□□□ 1.75
CHD1O14646 NUP210P1-202ENST00000504322 710 ntBASIC26■■□□□ 1.75
CHD1O14646 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC26■■□□□ 1.75
CHD1O14646 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
CHD1O14646 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC25.99■■□□□ 1.75
CHD1O14646 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC25.99■■□□□ 1.75
CHD1O14646 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
CHD1O14646 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
CHD1O14646 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHD1O14646 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC25.99■■□□□ 1.75
CHD1O14646 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC25.99■■□□□ 1.75
CHD1O14646 LINC02012-201ENST00000608206 1725 ntBASIC25.99■■□□□ 1.75
CHD1O14646 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHD1O14646 PTPA-218ENST00000435132 618 ntTSL 2 BASIC25.99■■□□□ 1.75
CHD1O14646 USP40-206ENST00000443711 628 ntTSL 2 BASIC25.99■■□□□ 1.75
CHD1O14646 SERPINA13P-202ENST00000478994 924 ntBASIC25.99■■□□□ 1.75
CHD1O14646 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC25.99■■□□□ 1.75
CHD1O14646 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC25.99■■□□□ 1.75
CHD1O14646 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC25.99■■□□□ 1.75
CHD1O14646 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC25.99■■□□□ 1.75
CHD1O14646 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC25.98■■□□□ 1.75
CHD1O14646 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC25.98■■□□□ 1.75
CHD1O14646 AC008132.1-202ENST00000342005 1389 ntBASIC25.98■■□□□ 1.75
CHD1O14646 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
CHD1O14646 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC25.98■■□□□ 1.75
CHD1O14646 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CHD1O14646 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
CHD1O14646 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC25.98■■□□□ 1.75
CHD1O14646 RN7SL11P-201ENST00000471305 293 ntBASIC25.98■■□□□ 1.75
CHD1O14646 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC25.98■■□□□ 1.75
CHD1O14646 AC022217.1-201ENST00000521069 738 ntBASIC25.98■■□□□ 1.75
CHD1O14646 HLA-C-210ENST00000640219 976 ntBASIC25.98■■□□□ 1.75
CHD1O14646 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
CHD1O14646 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC25.98■■□□□ 1.75
CHD1O14646 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC25.98■■□□□ 1.75
CHD1O14646 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC25.98■■□□□ 1.75
CHD1O14646 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC25.98■■□□□ 1.75
CHD1O14646 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC25.98■■□□□ 1.75
CHD1O14646 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CHD1O14646 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
CHD1O14646 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CHD1O14646 AL138781.2-201ENST00000617896 1843 ntBASIC25.97■■□□□ 1.75
CHD1O14646 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CHD1O14646 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC25.97■■□□□ 1.75
CHD1O14646 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC25.97■■□□□ 1.75
CHD1O14646 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC25.97■■□□□ 1.75
CHD1O14646 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC25.97■■□□□ 1.75
CHD1O14646 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
CHD1O14646 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC25.97■■□□□ 1.75
CHD1O14646 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CHD1O14646 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC25.97■■□□□ 1.75
CHD1O14646 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CHD1O14646 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
CHD1O14646 ABALON-201ENST00000629058 1903 ntBASIC25.97■■□□□ 1.75
CHD1O14646 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC25.97■■□□□ 1.75
CHD1O14646 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC25.97■■□□□ 1.75
CHD1O14646 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC25.97■■□□□ 1.75
CHD1O14646 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC25.97■■□□□ 1.75
CHD1O14646 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC25.97■■□□□ 1.75
CHD1O14646 NKAIN1P1-201ENST00000435754 582 ntBASIC25.97■■□□□ 1.75
CHD1O14646 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC25.97■■□□□ 1.75
CHD1O14646 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CHD1O14646 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC25.97■■□□□ 1.75
CHD1O14646 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC25.97■■□□□ 1.75
CHD1O14646 AF254983.2-201ENST00000612331 135 ntBASIC25.97■■□□□ 1.75
CHD1O14646 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CHD1O14646 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CHD1O14646 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CHD1O14646 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CHD1O14646 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CHD1O14646 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CHD1O14646 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CHD1O14646 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CHD1O14646 RN7SL181P-201ENST00000462921 277 ntBASIC25.96■■□□□ 1.75
CHD1O14646 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC25.96■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms