Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 RPSAP36-202ENST00000494591 1261 ntBASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 MIR4750-201ENST00000584564 56 ntBASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 AC114501.1-201ENST00000445949 172 ntBASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 HOMER2P2-201ENST00000451621 847 ntBASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 AC093503.3-201ENST00000624917 2352 ntBASIC18.82■□□□□ 0.6
TMEM88BA6NKF7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 AL133466.1-201ENST00000447582 150 ntBASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 ATP6V0CP2-201ENST00000469409 207 ntBASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 FTLP10-202ENST00000505798 471 ntBASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 AC025279.2-201ENST00000569730 653 ntBASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 AL353726.2-201ENST00000623259 884 ntBASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM88BA6NKF7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 AC015818.8-201ENST00000587907 1519 ntBASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 VDAC1P7-201ENST00000462417 847 ntBASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms