Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.59□□□□□ -0.23
A0A1W2PRF3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.59□□□□□ -0.23
A0A1W2PRF3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
A0A1W2PRF3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
A0A1W2PRF3 AL135744.1-201ENST00000565098 629 ntBASIC13.59□□□□□ -0.23
A0A1W2PRF3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.59□□□□□ -0.23
A0A1W2PRF3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.59□□□□□ -0.23
A0A1W2PRF3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
A0A1W2PRF3 AC026120.1-201ENST00000611536 926 ntBASIC13.59□□□□□ -0.23
A0A1W2PRF3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
A0A1W2PRF3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
A0A1W2PRF3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.59□□□□□ -0.23
A0A1W2PRF3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
A0A1W2PRF3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.59□□□□□ -0.23
A0A1W2PRF3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
A0A1W2PRF3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
A0A1W2PRF3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
A0A1W2PRF3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
A0A1W2PRF3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
A0A1W2PRF3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
A0A1W2PRF3 AL603756.1-201ENST00000606511 2163 ntBASIC13.59□□□□□ -0.23
A0A1W2PRF3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
A0A1W2PRF3 AC106886.4-201ENST00000623557 2502 ntBASIC13.59□□□□□ -0.23
A0A1W2PRF3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
A0A1W2PRF3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
A0A1W2PRF3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
A0A1W2PRF3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
A0A1W2PRF3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
A0A1W2PRF3 AC016027.1-202ENST00000607927 1699 ntBASIC13.59□□□□□ -0.23
A0A1W2PRF3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
A0A1W2PRF3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
A0A1W2PRF3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
A0A1W2PRF3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
A0A1W2PRF3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.58□□□□□ -0.23
A0A1W2PRF3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 AC063926.3-201ENST00000624734 5658 ntBASIC13.58□□□□□ -0.24
A0A1W2PRF3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 AC254562.1-201ENST00000417586 456 ntBASIC13.58□□□□□ -0.24
A0A1W2PRF3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 RARRES2P8-201ENST00000566335 367 ntBASIC13.58□□□□□ -0.24
A0A1W2PRF3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 AL161645.1-201ENST00000622716 1255 ntBASIC13.58□□□□□ -0.24
A0A1W2PRF3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 AC105339.1-204ENST00000636249 355 ntBASIC13.58□□□□□ -0.24
A0A1W2PRF3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 KRT18P28-201ENST00000453838 1332 ntBASIC13.58□□□□□ -0.24
A0A1W2PRF3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
A0A1W2PRF3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.58□□□□□ -0.24
A0A1W2PRF3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
A0A1W2PRF3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
A0A1W2PRF3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
A0A1W2PRF3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
A0A1W2PRF3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
A0A1W2PRF3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms