Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 POU5F1P6-201ENST00000466990 990 ntBASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 SART3-203ENST00000546611 1184 ntBASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 AL353732.1-201ENST00000569618 1459 ntBASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 PCGF3-213ENST00000620529 1899 ntBASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 FGFR3P6-201ENST00000457012 610 ntBASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 SLC25A6P2-201ENST00000497974 877 ntBASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 CYP2A7P1-201ENST00000595391 815 ntBASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 AC093458.2-201ENST00000623150 629 ntBASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 AL805961.1-202ENST00000641562 540 ntBASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 SLC22A20-204ENST00000530038 1673 ntBASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-7A0A0A0MS04 AC112504.1-201ENST00000623415 1841 ntBASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 PMS2P1-201ENST00000431037 1228 ntBASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 SCARNA2-201ENST00000458748 420 ntBASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 KRT18P35-201ENST00000510488 1269 ntBASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 AL121772.3-201ENST00000610840 674 ntBASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
TRBV6-7A0A0A0MS04 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms