Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 AL589702.1-201ENST00000641229 1509 ntBASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 SPDYE17-201ENST00000412399 783 ntBASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 ACA64.2-201ENST00000459014 129 ntBASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 SPDYE18-201ENST00000510091 1050 ntBASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 AC106886.1-201ENST00000568660 600 ntBASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 AC061975.2-201ENST00000581722 295 ntBASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 SRD5A3P1-201ENST00000603021 949 ntBASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 AC004790.1-201ENST00000612686 536 ntBASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 MIR6069-201ENST00000620069 79 ntBASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC187A0A096LP49 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CCDC187A0A096LP49 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC187A0A096LP49 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.52■□□□□ 0.08
CCDC187A0A096LP49 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC187A0A096LP49 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC187A0A096LP49 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.52■□□□□ 0.08
CCDC187A0A096LP49 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC187A0A096LP49 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CCDC187A0A096LP49 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC187A0A096LP49 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC187A0A096LP49 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC187A0A096LP49 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.52■□□□□ 0.08
CCDC187A0A096LP49 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC187A0A096LP49 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC187A0A096LP49 CROCCP2-202ENST00000412962 2773 ntBASIC15.52■□□□□ 0.08
CCDC187A0A096LP49 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
CCDC187A0A096LP49 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.52■□□□□ 0.08
CCDC187A0A096LP49 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.52■□□□□ 0.08
CCDC187A0A096LP49 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.52■□□□□ 0.08
CCDC187A0A096LP49 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC187A0A096LP49 MIR6805-201ENST00000615055 62 ntBASIC15.52■□□□□ 0.08
CCDC187A0A096LP49 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC187A0A096LP49 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC187A0A096LP49 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC187A0A096LP49 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC187A0A096LP49 AC092053.1-201ENST00000605787 1936 ntBASIC15.52■□□□□ 0.07
CCDC187A0A096LP49 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.52■□□□□ 0.07
CCDC187A0A096LP49 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CCDC187A0A096LP49 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC187A0A096LP49 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC187A0A096LP49 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.52■□□□□ 0.07
CCDC187A0A096LP49 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CCDC187A0A096LP49 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.52■□□□□ 0.07
CCDC187A0A096LP49 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC187A0A096LP49 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.52■□□□□ 0.07
CCDC187A0A096LP49 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 KRT17P8-201ENST00000540749 863 ntBASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 RAB43P1-201ENST00000561790 589 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms