Protein–RNA interactions for Protein: Q9Y620

RAD54B, DNA repair and recombination protein RAD54B, humanhuman

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD54BQ9Y620 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RAD54BQ9Y620 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD54BQ9Y620 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.11■□□□□ 0.33
RAD54BQ9Y620 POU5F1P6-201ENST00000466990 990 ntBASIC17.11■□□□□ 0.33
RAD54BQ9Y620 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD54BQ9Y620 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAD54BQ9Y620 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD54BQ9Y620 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD54BQ9Y620 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD54BQ9Y620 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAD54BQ9Y620 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD54BQ9Y620 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD54BQ9Y620 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.11■□□□□ 0.33
RAD54BQ9Y620 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.11■□□□□ 0.33
RAD54BQ9Y620 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD54BQ9Y620 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD54BQ9Y620 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD54BQ9Y620 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD54BQ9Y620 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.11■□□□□ 0.33
RAD54BQ9Y620 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD54BQ9Y620 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAD54BQ9Y620 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
RAD54BQ9Y620 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 RNU1-129P-201ENST00000384064 167 ntBASIC17.1■□□□□ 0.33
RAD54BQ9Y620 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 FAM86GP-201ENST00000448322 971 ntBASIC17.1■□□□□ 0.33
RAD54BQ9Y620 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 AC069335.1-201ENST00000489972 472 ntBASIC17.1■□□□□ 0.33
RAD54BQ9Y620 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 SPCS2P1-201ENST00000561636 679 ntBASIC17.1■□□□□ 0.33
RAD54BQ9Y620 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 U1.21-201ENST00000580816 167 ntBASIC17.1■□□□□ 0.33
RAD54BQ9Y620 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 Z92544.3-201ENST00000624747 417 ntBASIC17.1■□□□□ 0.33
RAD54BQ9Y620 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 PCDHB19P-201ENST00000570871 2371 ntBASIC17.1■□□□□ 0.33
RAD54BQ9Y620 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 MTHFR-217ENST00000641820 1569 ntBASIC17.1■□□□□ 0.33
RAD54BQ9Y620 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RAD54BQ9Y620 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 AC006449.5-201ENST00000610658 2098 ntBASIC17.09■□□□□ 0.33
RAD54BQ9Y620 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 KRT18P32-201ENST00000424695 1287 ntBASIC17.09■□□□□ 0.33
RAD54BQ9Y620 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 RN7SL589P-201ENST00000481268 310 ntBASIC17.09■□□□□ 0.33
RAD54BQ9Y620 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 AC005498.2-205ENST00000593218 784 ntBASIC17.09■□□□□ 0.33
RAD54BQ9Y620 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 AL009183.1-201ENST00000603760 355 ntBASIC17.09■□□□□ 0.33
RAD54BQ9Y620 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.09■□□□□ 0.33
RAD54BQ9Y620 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms