Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CTDP1Q9Y5B0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CTDP1Q9Y5B0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.02■□□□□ 0.63
CTDP1Q9Y5B0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
CTDP1Q9Y5B0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 UGT1A2P-201ENST00000454886 866 ntBASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 RN7SL204P-201ENST00000582831 262 ntBASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 SNX33P1-201ENST00000592116 1762 ntBASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CTDP1Q9Y5B0 AC100757.3-201ENST00000622361 1406 ntBASIC19■□□□□ 0.63
CTDP1Q9Y5B0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 FAM207CP-201ENST00000443486 507 ntBASIC19■□□□□ 0.63
CTDP1Q9Y5B0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 LINC02560-201ENST00000596379 459 ntBASIC19■□□□□ 0.63
CTDP1Q9Y5B0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 AC139713.2-201ENST00000641328 2723 ntBASIC19■□□□□ 0.63
CTDP1Q9Y5B0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19■□□□□ 0.63
CTDP1Q9Y5B0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTDP1Q9Y5B0 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms