Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 RN7SL606P-201ENST00000472779 293 ntBASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 AP005117.1-202ENST00000581724 1908 ntBASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.87□□□□□ -0.19
KCNIP3Q9Y2W7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 AP002414.1-201ENST00000391405 1147 ntBASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 AC090616.6-201ENST00000582640 721 ntBASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 AC067750.1-201ENST00000608826 6545 ntBASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP3Q9Y2W7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KCNIP3Q9Y2W7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.85□□□□□ -0.19
KCNIP3Q9Y2W7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KCNIP3Q9Y2W7 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.85□□□□□ -0.19
KCNIP3Q9Y2W7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KCNIP3Q9Y2W7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KCNIP3Q9Y2W7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.85□□□□□ -0.19
KCNIP3Q9Y2W7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.85□□□□□ -0.19
KCNIP3Q9Y2W7 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KCNIP3Q9Y2W7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KCNIP3Q9Y2W7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
KCNIP3Q9Y2W7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.85□□□□□ -0.19
KCNIP3Q9Y2W7 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KCNIP3Q9Y2W7 AC144831.1-201ENST00000573312 2656 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms