Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 RNA5SP412-201ENST00000516234 123 ntBASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 AL022328.1-201ENST00000610050 478 ntBASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 CU634019.7-201ENST00000624153 1185 ntBASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 FP236241.2-201ENST00000624906 1185 ntBASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 GGT3P-204ENST00000453783 1664 ntBASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SLC52A1Q9NWF4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLC52A1Q9NWF4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLC52A1Q9NWF4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC23.24■■□□□ 1.31
SLC52A1Q9NWF4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC23.24■■□□□ 1.31
SLC52A1Q9NWF4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SLC52A1Q9NWF4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC23.24■■□□□ 1.31
SLC52A1Q9NWF4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SLC52A1Q9NWF4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC23.24■■□□□ 1.31
SLC52A1Q9NWF4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SLC52A1Q9NWF4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
SLC52A1Q9NWF4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC23.24■■□□□ 1.31
SLC52A1Q9NWF4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC23.24■■□□□ 1.31
SLC52A1Q9NWF4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
SLC52A1Q9NWF4 MIR6787-201ENST00000616675 61 ntBASIC23.24■■□□□ 1.31
SLC52A1Q9NWF4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SLC52A1Q9NWF4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC23.24■■□□□ 1.31
SLC52A1Q9NWF4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC23.24■■□□□ 1.31
SLC52A1Q9NWF4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC23.24■■□□□ 1.31
SLC52A1Q9NWF4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLC52A1Q9NWF4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 AC074338.1-201ENST00000416825 156 ntBASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 AC099336.1-201ENST00000417053 1171 ntBASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 FO681548.1-201ENST00000455617 1132 ntBASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 ENPP7P5-201ENST00000541031 1031 ntBASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SLC52A1Q9NWF4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 AC005229.1-201ENST00000392885 409 ntBASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 AC245100.3-201ENST00000441281 285 ntBASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 AC245100.5-201ENST00000452108 331 ntBASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
SLC52A1Q9NWF4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC23.21■■□□□ 1.31
SLC52A1Q9NWF4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SLC52A1Q9NWF4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SLC52A1Q9NWF4 AZGP1P1-201ENST00000411909 902 ntBASIC23.21■■□□□ 1.31
SLC52A1Q9NWF4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SLC52A1Q9NWF4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC23.21■■□□□ 1.31
SLC52A1Q9NWF4 AL355994.2-201ENST00000447882 704 ntBASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms