Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TUBB1Q9H4B7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.9■□□□□ 0.14
TUBB1Q9H4B7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TUBB1Q9H4B7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
TUBB1Q9H4B7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 AC144831.1-201ENST00000573312 2656 ntBASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 MRPL20P1-201ENST00000400819 433 ntBASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 HMGA1P7-201ENST00000406908 502 ntBASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 PGM5P2-202ENST00000637225 1043 ntBASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TUBB1Q9H4B7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 RNU1-129P-201ENST00000384064 167 ntBASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 MIR648-201ENST00000385046 94 ntBASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 FAM197Y8-203ENST00000450145 560 ntBASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 EMBP1-201ENST00000458200 901 ntBASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 AL160237.2-201ENST00000556165 472 ntBASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 U1.21-201ENST00000580816 167 ntBASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 MIR4515-201ENST00000584082 81 ntBASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 CROCCP1-201ENST00000426910 5675 ntBASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.88■□□□□ 0.13
TUBB1Q9H4B7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TUBB1Q9H4B7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TUBB1Q9H4B7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.87■□□□□ 0.13
TUBB1Q9H4B7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TUBB1Q9H4B7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.87■□□□□ 0.13
TUBB1Q9H4B7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TUBB1Q9H4B7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TUBB1Q9H4B7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TUBB1Q9H4B7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TUBB1Q9H4B7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.87■□□□□ 0.13
TUBB1Q9H4B7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TUBB1Q9H4B7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.87■□□□□ 0.13
TUBB1Q9H4B7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TUBB1Q9H4B7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TUBB1Q9H4B7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TUBB1Q9H4B7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TUBB1Q9H4B7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
TUBB1Q9H4B7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms