Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 HIST1H2APS4-201ENST00000362070 348 ntBASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 SAPCD2P2-201ENST00000431719 1174 ntBASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 GXYLT1P6-201ENST00000456472 1187 ntBASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 AL512604.3-201ENST00000569583 964 ntBASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 AC111152.3-201ENST00000569699 673 ntBASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 AC109462.3-201ENST00000573934 613 ntBASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 AP005242.2-201ENST00000580065 1175 ntBASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 AC060766.1-201ENST00000590824 627 ntBASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 ACTG1P22-201ENST00000603793 1099 ntBASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 IKBKGP1-201ENST00000612193 1073 ntBASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 ANKRD20A8P-203ENST00000641373 517 ntBASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 SUPT20HL2-201ENST00000486479 2409 ntBASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 TNRC18P2-201ENST00000417666 2714 ntBASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 AC023157.3-201ENST00000619086 2088 ntBASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 GOLGA8DP-202ENST00000341390 2184 ntBASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 AC006449.6-201ENST00000612330 2296 ntBASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LCE3DQ9BYE3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
LCE3DQ9BYE3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms