Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 AC004522.1-201ENST00000419978 654 ntBASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 AL132780.4-201ENST00000624870 1135 ntBASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL25A1Q9BXS0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 AC006335.1-201ENST00000445200 547 ntBASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 AC116345.2-201ENST00000512837 523 ntBASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 AC103988.2-201ENST00000561804 725 ntBASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 AL353622.2-201ENST00000605846 425 ntBASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.31■□□□□ 0.2
COL25A1Q9BXS0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 AL589702.1-201ENST00000641229 1509 ntBASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 KRT8P35-201ENST00000483942 1338 ntBASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 CD8B2-202ENST00000417670 633 ntBASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 RPS9P1-201ENST00000419943 583 ntBASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 AC079178.1-201ENST00000420915 656 ntBASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 AL353637.1-201ENST00000451571 732 ntBASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 AP002803.1-201ENST00000528836 498 ntBASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 RTN3P1-201ENST00000536295 711 ntBASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 HKR1-225ENST00000592168 566 ntTSL 4 BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL25A1Q9BXS0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
COL25A1Q9BXS0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL25A1Q9BXS0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.29■□□□□ 0.2
COL25A1Q9BXS0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL25A1Q9BXS0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL25A1Q9BXS0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL25A1Q9BXS0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.29■□□□□ 0.2
COL25A1Q9BXS0 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC16.29■□□□□ 0.2
COL25A1Q9BXS0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL25A1Q9BXS0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL25A1Q9BXS0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL25A1Q9BXS0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
COL25A1Q9BXS0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms