Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 AC106881.1-201ENST00000605849 3329 ntBASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 AC010327.5-201ENST00000586923 3061 ntBASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 AC092364.2-201ENST00000596710 2692 ntBASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFAF3Q9BU61 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 LINC00265-3P-201ENST00000447588 903 ntBASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 GUSBP12-201ENST00000513727 720 ntBASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 PPOX-214ENST00000535223 664 ntTSL 3 BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 VPS72-207ENST00000640458 689 ntTSL 5 BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 MED29-202ENST00000594368 1471 ntTSL 2 BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 AC099343.3-201ENST00000605834 2503 ntBASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFAF3Q9BU61 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
NDUFAF3Q9BU61 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
NDUFAF3Q9BU61 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
NDUFAF3Q9BU61 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.83□□□□□ -0.35
NDUFAF3Q9BU61 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
NDUFAF3Q9BU61 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
NDUFAF3Q9BU61 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
NDUFAF3Q9BU61 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
NDUFAF3Q9BU61 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 LINC00528-201ENST00000600723 2160 ntBASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms