Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CMKLR1Q99788 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CMKLR1Q99788 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CMKLR1Q99788 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CMKLR1Q99788 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CMKLR1Q99788 AC009053.2-201ENST00000563701 2365 ntBASIC15.74■□□□□ 0.11
CMKLR1Q99788 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.74■□□□□ 0.11
CMKLR1Q99788 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.74■□□□□ 0.11
CMKLR1Q99788 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.74■□□□□ 0.11
CMKLR1Q99788 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.74■□□□□ 0.11
CMKLR1Q99788 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.74■□□□□ 0.11
CMKLR1Q99788 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.74■□□□□ 0.11
CMKLR1Q99788 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.74■□□□□ 0.11
CMKLR1Q99788 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CMKLR1Q99788 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.74■□□□□ 0.11
CMKLR1Q99788 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.74■□□□□ 0.11
CMKLR1Q99788 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.74■□□□□ 0.11
CMKLR1Q99788 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.74■□□□□ 0.11
CMKLR1Q99788 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.74■□□□□ 0.11
CMKLR1Q99788 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CMKLR1Q99788 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CMKLR1Q99788 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.74■□□□□ 0.11
CMKLR1Q99788 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.74■□□□□ 0.11
CMKLR1Q99788 RN7SL828P-201ENST00000607615 303 ntBASIC15.74■□□□□ 0.11
CMKLR1Q99788 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CMKLR1Q99788 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CMKLR1Q99788 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CMKLR1Q99788 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.74■□□□□ 0.11
CMKLR1Q99788 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CMKLR1Q99788 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CMKLR1Q99788 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.74■□□□□ 0.11
CMKLR1Q99788 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.74■□□□□ 0.11
CMKLR1Q99788 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
CMKLR1Q99788 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CMKLR1Q99788 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CMKLR1Q99788 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CMKLR1Q99788 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.73■□□□□ 0.11
CMKLR1Q99788 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CMKLR1Q99788 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 AC141586.5-201ENST00000624546 2050 ntBASIC15.73■□□□□ 0.11
CMKLR1Q99788 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.73■□□□□ 0.11
CMKLR1Q99788 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 RN7SL692P-201ENST00000464677 288 ntBASIC15.73■□□□□ 0.11
CMKLR1Q99788 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.73■□□□□ 0.11
CMKLR1Q99788 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.73■□□□□ 0.11
CMKLR1Q99788 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 TEX28P1-201ENST00000613479 1221 ntBASIC15.73■□□□□ 0.11
CMKLR1Q99788 TEX28P2-201ENST00000617764 1221 ntBASIC15.73■□□□□ 0.11
CMKLR1Q99788 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CMKLR1Q99788 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CMKLR1Q99788 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CMKLR1Q99788 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.73■□□□□ 0.11
CMKLR1Q99788 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.73■□□□□ 0.11
CMKLR1Q99788 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.73■□□□□ 0.11
CMKLR1Q99788 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.73■□□□□ 0.11
CMKLR1Q99788 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CMKLR1Q99788 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 PCDHA12-202ENST00000613593 2588 ntBASIC15.73■□□□□ 0.11
CMKLR1Q99788 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CMKLR1Q99788 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CMKLR1Q99788 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CMKLR1Q99788 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CMKLR1Q99788 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.72■□□□□ 0.11
CMKLR1Q99788 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CMKLR1Q99788 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CMKLR1Q99788 KRT8P39-201ENST00000396270 1433 ntBASIC15.72■□□□□ 0.11
CMKLR1Q99788 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CMKLR1Q99788 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
CMKLR1Q99788 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CMKLR1Q99788 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CMKLR1Q99788 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CMKLR1Q99788 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CMKLR1Q99788 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CMKLR1Q99788 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.72■□□□□ 0.11
CMKLR1Q99788 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CMKLR1Q99788 SPTLC1P1-201ENST00000447199 261 ntBASIC15.72■□□□□ 0.11
CMKLR1Q99788 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms