Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 AC211486.1-202ENST00000416371 468 ntBASIC13.69□□□□□ -0.22
GAFA1Q96PS6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 AC211476.1-201ENST00000503899 468 ntBASIC13.69□□□□□ -0.22
GAFA1Q96PS6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 AC105233.2-201ENST00000523697 349 ntBASIC13.69□□□□□ -0.22
GAFA1Q96PS6 AF228730.5-201ENST00000530288 346 ntBASIC13.69□□□□□ -0.22
GAFA1Q96PS6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 AC073389.1-201ENST00000595595 795 ntBASIC13.69□□□□□ -0.22
GAFA1Q96PS6 AC022145.2-201ENST00000598203 171 ntBASIC13.69□□□□□ -0.22
GAFA1Q96PS6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 REXO1L8P-201ENST00000604378 1897 ntBASIC13.69□□□□□ -0.22
GAFA1Q96PS6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
GAFA1Q96PS6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 MIR1233-2-201ENST00000408138 82 ntBASIC13.68□□□□□ -0.22
GAFA1Q96PS6 MIR1233-1-201ENST00000408722 82 ntBASIC13.68□□□□□ -0.22
GAFA1Q96PS6 AL592309.1-201ENST00000443127 649 ntBASIC13.68□□□□□ -0.22
GAFA1Q96PS6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 IGHV3-62-201ENST00000520057 340 ntBASIC13.68□□□□□ -0.22
GAFA1Q96PS6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 AC055717.3-201ENST00000622967 595 ntBASIC13.68□□□□□ -0.22
GAFA1Q96PS6 AL513210.1-201ENST00000629608 234 ntBASIC13.68□□□□□ -0.22
GAFA1Q96PS6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
GAFA1Q96PS6 U82695.1-201ENST00000635752 1889 ntBASIC13.67□□□□□ -0.22
GAFA1Q96PS6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms