Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 AP005117.1-202ENST00000581724 1908 ntBASIC11.98□□□□□ -0.49
C9orf85Q96MD7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 AC112504.1-201ENST00000623415 1841 ntBASIC11.97□□□□□ -0.49
C9orf85Q96MD7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 AC069224.1-201ENST00000566372 1715 ntBASIC11.97□□□□□ -0.49
C9orf85Q96MD7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 AL592424.1-201ENST00000563624 1536 ntBASIC11.97□□□□□ -0.49
C9orf85Q96MD7 AC012569.1-201ENST00000591191 1524 ntBASIC11.97□□□□□ -0.49
C9orf85Q96MD7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 RPS2P1-201ENST00000434010 821 ntBASIC11.97□□□□□ -0.49
C9orf85Q96MD7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 AC073648.2-201ENST00000510116 352 ntBASIC11.97□□□□□ -0.49
C9orf85Q96MD7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 MIR1199-201ENST00000621445 119 ntBASIC11.97□□□□□ -0.49
C9orf85Q96MD7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC11.97□□□□□ -0.49
C9orf85Q96MD7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC11.96□□□□□ -0.49
C9orf85Q96MD7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms