Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 AL031731.1-201ENST00000642131 2094 ntBASIC17.05■□□□□ 0.32
C9orf72Q96LT7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 AC139887.3-201ENST00000568585 713 ntBASIC17.04■□□□□ 0.32
C9orf72Q96LT7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 AF228730.7-201ENST00000641842 219 ntBASIC17.04■□□□□ 0.32
C9orf72Q96LT7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 AC006449.6-201ENST00000612330 2296 ntBASIC17.04■□□□□ 0.32
C9orf72Q96LT7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf72Q96LT7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 BX005266.1-201ENST00000473402 457 ntBASIC17.03■□□□□ 0.32
C9orf72Q96LT7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 NKAPP1-205ENST00000585790 367 ntBASIC17.03■□□□□ 0.32
C9orf72Q96LT7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 AC144831.1-201ENST00000573312 2656 ntBASIC17.03■□□□□ 0.32
C9orf72Q96LT7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf72Q96LT7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
C9orf72Q96LT7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C9orf72Q96LT7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms