Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALPK3Q96L96 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ALPK3Q96L96 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.62■□□□□ 0.41
ALPK3Q96L96 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.62■□□□□ 0.41
ALPK3Q96L96 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.62■□□□□ 0.41
ALPK3Q96L96 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ALPK3Q96L96 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.62■□□□□ 0.41
ALPK3Q96L96 AL662890.1-201ENST00000396818 632 ntBASIC17.62■□□□□ 0.41
ALPK3Q96L96 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ALPK3Q96L96 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.62■□□□□ 0.41
ALPK3Q96L96 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.62■□□□□ 0.41
ALPK3Q96L96 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.62■□□□□ 0.41
ALPK3Q96L96 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ALPK3Q96L96 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALPK3Q96L96 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.62■□□□□ 0.41
ALPK3Q96L96 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.61■□□□□ 0.41
ALPK3Q96L96 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALPK3Q96L96 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ALPK3Q96L96 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALPK3Q96L96 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ALPK3Q96L96 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALPK3Q96L96 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ALPK3Q96L96 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ALPK3Q96L96 FO393414.2-201ENST00000405153 598 ntBASIC17.61■□□□□ 0.41
ALPK3Q96L96 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.61■□□□□ 0.41
ALPK3Q96L96 IMP3P2-201ENST00000489760 475 ntBASIC17.61■□□□□ 0.41
ALPK3Q96L96 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
ALPK3Q96L96 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.61■□□□□ 0.41
ALPK3Q96L96 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ALPK3Q96L96 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.61■□□□□ 0.41
ALPK3Q96L96 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.61■□□□□ 0.41
ALPK3Q96L96 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.61■□□□□ 0.41
ALPK3Q96L96 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.61■□□□□ 0.41
ALPK3Q96L96 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.61■□□□□ 0.41
ALPK3Q96L96 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.61■□□□□ 0.41
ALPK3Q96L96 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALPK3Q96L96 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ALPK3Q96L96 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.61■□□□□ 0.41
ALPK3Q96L96 AL354751.1-201ENST00000412768 1863 ntBASIC17.61■□□□□ 0.41
ALPK3Q96L96 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALPK3Q96L96 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ALPK3Q96L96 GGT4P-201ENST00000623672 1708 ntBASIC17.61■□□□□ 0.41
ALPK3Q96L96 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.61■□□□□ 0.41
ALPK3Q96L96 BICD1-207ENST00000551848 1962 ntBASIC17.61■□□□□ 0.41
ALPK3Q96L96 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.61■□□□□ 0.41
ALPK3Q96L96 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ALPK3Q96L96 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALPK3Q96L96 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ALPK3Q96L96 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
ALPK3Q96L96 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALPK3Q96L96 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALPK3Q96L96 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALPK3Q96L96 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ALPK3Q96L96 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.6■□□□□ 0.41
ALPK3Q96L96 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.6■□□□□ 0.41
ALPK3Q96L96 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.6■□□□□ 0.41
ALPK3Q96L96 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALPK3Q96L96 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.6■□□□□ 0.41
ALPK3Q96L96 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.6■□□□□ 0.41
ALPK3Q96L96 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.6■□□□□ 0.41
ALPK3Q96L96 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.6■□□□□ 0.41
ALPK3Q96L96 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALPK3Q96L96 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
ALPK3Q96L96 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ALPK3Q96L96 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ALPK3Q96L96 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ALPK3Q96L96 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ALPK3Q96L96 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.6■□□□□ 0.41
ALPK3Q96L96 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALPK3Q96L96 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALPK3Q96L96 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALPK3Q96L96 AC018735.1-201ENST00000437208 1502 ntBASIC17.6■□□□□ 0.41
ALPK3Q96L96 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.6■□□□□ 0.41
ALPK3Q96L96 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALPK3Q96L96 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ALPK3Q96L96 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.6■□□□□ 0.41
ALPK3Q96L96 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ALPK3Q96L96 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.6■□□□□ 0.41
ALPK3Q96L96 KRT18P64-201ENST00000434946 1219 ntBASIC17.6■□□□□ 0.41
ALPK3Q96L96 AC004898.1-201ENST00000451057 766 ntBASIC17.6■□□□□ 0.41
ALPK3Q96L96 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.6■□□□□ 0.41
ALPK3Q96L96 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.6■□□□□ 0.41
ALPK3Q96L96 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.6■□□□□ 0.41
ALPK3Q96L96 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.6■□□□□ 0.41
ALPK3Q96L96 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ALPK3Q96L96 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ALPK3Q96L96 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALPK3Q96L96 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALPK3Q96L96 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.6■□□□□ 0.41
ALPK3Q96L96 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
ALPK3Q96L96 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ALPK3Q96L96 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.59■□□□□ 0.41
ALPK3Q96L96 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.59■□□□□ 0.41
ALPK3Q96L96 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ALPK3Q96L96 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.59■□□□□ 0.41
ALPK3Q96L96 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.59■□□□□ 0.41
ALPK3Q96L96 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
ALPK3Q96L96 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ALPK3Q96L96 RPL17P11-201ENST00000417593 544 ntBASIC17.59■□□□□ 0.41
ALPK3Q96L96 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms