Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM54Q969K7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM54Q969K7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.49□□□□□ -0.09
TMEM54Q969K7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM54Q969K7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TMEM54Q969K7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TMEM54Q969K7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.49□□□□□ -0.09
TMEM54Q969K7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM54Q969K7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM54Q969K7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM54Q969K7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM54Q969K7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM54Q969K7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM54Q969K7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM54Q969K7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.49□□□□□ -0.09
TMEM54Q969K7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM54Q969K7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.49□□□□□ -0.09
TMEM54Q969K7 HTR5BP-201ENST00000430851 1154 ntBASIC14.49□□□□□ -0.09
TMEM54Q969K7 DNAJB3-201ENST00000446806 729 ntBASIC14.49□□□□□ -0.09
TMEM54Q969K7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.49□□□□□ -0.09
TMEM54Q969K7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.49□□□□□ -0.09
TMEM54Q969K7 RN7SL589P-201ENST00000481268 310 ntBASIC14.49□□□□□ -0.09
TMEM54Q969K7 ALG1L5P-201ENST00000482043 771 ntBASIC14.49□□□□□ -0.09
TMEM54Q969K7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.49□□□□□ -0.09
TMEM54Q969K7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.49□□□□□ -0.09
TMEM54Q969K7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.49□□□□□ -0.09
TMEM54Q969K7 AC026120.1-201ENST00000611536 926 ntBASIC14.49□□□□□ -0.09
TMEM54Q969K7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.49□□□□□ -0.09
TMEM54Q969K7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM54Q969K7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM54Q969K7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TMEM54Q969K7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM54Q969K7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.49□□□□□ -0.09
TMEM54Q969K7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.49□□□□□ -0.09
TMEM54Q969K7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM54Q969K7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM54Q969K7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM54Q969K7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM54Q969K7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM54Q969K7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM54Q969K7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM54Q969K7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM54Q969K7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM54Q969K7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 AL589702.1-201ENST00000641229 1509 ntBASIC14.48□□□□□ -0.09
TMEM54Q969K7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.48□□□□□ -0.09
TMEM54Q969K7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM54Q969K7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM54Q969K7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM54Q969K7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM54Q969K7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 AC008267.7-201ENST00000624570 1194 ntBASIC14.48□□□□□ -0.09
TMEM54Q969K7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM54Q969K7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM54Q969K7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM54Q969K7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM54Q969K7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM54Q969K7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM54Q969K7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TMEM54Q969K7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TMEM54Q969K7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM54Q969K7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms