Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.26■□□□□ 0.03
CT55Q8WUE5 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CT55Q8WUE5 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CT55Q8WUE5 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CT55Q8WUE5 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CT55Q8WUE5 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CT55Q8WUE5 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CT55Q8WUE5 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CT55Q8WUE5 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.26■□□□□ 0.03
CT55Q8WUE5 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.26■□□□□ 0.03
CT55Q8WUE5 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.26■□□□□ 0.03
CT55Q8WUE5 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CT55Q8WUE5 MEIS3P1-201ENST00000495167 958 ntBASIC15.26■□□□□ 0.03
CT55Q8WUE5 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.26■□□□□ 0.03
CT55Q8WUE5 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.26■□□□□ 0.03
CT55Q8WUE5 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CT55Q8WUE5 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.26■□□□□ 0.03
CT55Q8WUE5 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.26■□□□□ 0.03
CT55Q8WUE5 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.26■□□□□ 0.03
CT55Q8WUE5 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CT55Q8WUE5 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CT55Q8WUE5 PCGF3-213ENST00000620529 1899 ntBASIC15.26■□□□□ 0.03
CT55Q8WUE5 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CT55Q8WUE5 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.26■□□□□ 0.03
CT55Q8WUE5 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CT55Q8WUE5 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CT55Q8WUE5 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CT55Q8WUE5 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CT55Q8WUE5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.26■□□□□ 0.03
CT55Q8WUE5 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CT55Q8WUE5 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CT55Q8WUE5 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CT55Q8WUE5 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CT55Q8WUE5 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CT55Q8WUE5 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CT55Q8WUE5 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CT55Q8WUE5 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CT55Q8WUE5 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.25■□□□□ 0.03
CT55Q8WUE5 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.25■□□□□ 0.03
CT55Q8WUE5 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CT55Q8WUE5 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CT55Q8WUE5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CT55Q8WUE5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CT55Q8WUE5 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CT55Q8WUE5 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.25■□□□□ 0.03
CT55Q8WUE5 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CT55Q8WUE5 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CT55Q8WUE5 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CT55Q8WUE5 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CT55Q8WUE5 OR8S1-201ENST00000310194 1080 ntBASIC15.25■□□□□ 0.03
CT55Q8WUE5 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CT55Q8WUE5 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.25■□□□□ 0.03
CT55Q8WUE5 SPDYE17-201ENST00000412399 783 ntBASIC15.25■□□□□ 0.03
CT55Q8WUE5 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CT55Q8WUE5 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
CT55Q8WUE5 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.25■□□□□ 0.03
CT55Q8WUE5 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.25■□□□□ 0.03
CT55Q8WUE5 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.25■□□□□ 0.03
CT55Q8WUE5 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.25■□□□□ 0.03
CT55Q8WUE5 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.25■□□□□ 0.03
CT55Q8WUE5 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.25■□□□□ 0.03
CT55Q8WUE5 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CT55Q8WUE5 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CT55Q8WUE5 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CT55Q8WUE5 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CT55Q8WUE5 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CT55Q8WUE5 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.25■□□□□ 0.03
CT55Q8WUE5 AC138969.3-201ENST00000546612 1459 ntBASIC15.25■□□□□ 0.03
CT55Q8WUE5 AC138932.2-201ENST00000548268 1459 ntBASIC15.25■□□□□ 0.03
CT55Q8WUE5 AC126755.4-201ENST00000549796 1459 ntBASIC15.25■□□□□ 0.03
CT55Q8WUE5 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CT55Q8WUE5 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CT55Q8WUE5 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CT55Q8WUE5 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.25■□□□□ 0.03
CT55Q8WUE5 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.25■□□□□ 0.03
CT55Q8WUE5 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CT55Q8WUE5 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CT55Q8WUE5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CT55Q8WUE5 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CT55Q8WUE5 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CT55Q8WUE5 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.24■□□□□ 0.03
CT55Q8WUE5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CT55Q8WUE5 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CT55Q8WUE5 AC106820.2-201ENST00000563775 3264 ntBASIC15.24■□□□□ 0.03
CT55Q8WUE5 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CT55Q8WUE5 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.24■□□□□ 0.03
CT55Q8WUE5 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CT55Q8WUE5 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CT55Q8WUE5 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CT55Q8WUE5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CT55Q8WUE5 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CT55Q8WUE5 DGCR5-201ENST00000399539 862 ntBASIC15.24■□□□□ 0.03
CT55Q8WUE5 AC087499.6-201ENST00000411576 835 ntBASIC15.24■□□□□ 0.03
CT55Q8WUE5 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.24■□□□□ 0.03
CT55Q8WUE5 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CT55Q8WUE5 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.24■□□□□ 0.03
CT55Q8WUE5 AC114501.2-201ENST00000439631 535 ntBASIC15.24■□□□□ 0.03
CT55Q8WUE5 AL139010.1-201ENST00000454878 894 ntBASIC15.24■□□□□ 0.03
CT55Q8WUE5 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CT55Q8WUE5 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms