Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 GGT4P-201ENST00000623672 1708 ntBASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 AC067930.6-201ENST00000623257 4947 ntBASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 AC092902.6-201ENST00000641783 218 ntBASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 FLJ38576-201ENST00000623820 2459 ntBASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 AGGF1P2-201ENST00000426656 2106 ntBASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
RAB42Q8N4Z0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 TFAMP1-201ENST00000412727 736 ntBASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 POU5F1P6-201ENST00000466990 990 ntBASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 ALG1L5P-201ENST00000482043 771 ntBASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 AC099522.2-201ENST00000607001 744 ntBASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 AC026120.1-201ENST00000611536 926 ntBASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB42Q8N4Z0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms