Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 AC093525.8-201ENST00000624099 1342 ntBASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 AC106760.1-201ENST00000508690 800 ntBASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 KRT8P22-201ENST00000562317 1415 ntBASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 AC105020.1-201ENST00000435356 2205 ntBASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COL27A1Q8IZC6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 TUBB1P2-201ENST00000422712 1306 ntBASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 TUBB1P1-201ENST00000503144 1300 ntBASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 RPL7P3-201ENST00000441388 714 ntBASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 RNF216P1-203ENST00000404404 2427 ntBASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 MSTO2P-201ENST00000314835 1709 ntBASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COL27A1Q8IZC6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
COL27A1Q8IZC6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
COL27A1Q8IZC6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.21■□□□□ 0.02
COL27A1Q8IZC6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.21■□□□□ 0.02
COL27A1Q8IZC6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
COL27A1Q8IZC6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 BCYRN1-201ENST00000418539 200 ntBASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 FAM86LP-201ENST00000478302 853 ntBASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 AC104596.2-201ENST00000512793 793 ntBASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 AC120045.2-201ENST00000567334 178 ntBASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 BNIP3P1-202ENST00000550043 1585 ntBASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL27A1Q8IZC6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms