Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLX4Q8IY92 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLX4Q8IY92 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLX4Q8IY92 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLX4Q8IY92 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLX4Q8IY92 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLX4Q8IY92 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLX4Q8IY92 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLX4Q8IY92 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLX4Q8IY92 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 SOCS2P1-201ENST00000417727 557 ntBASIC19.72■□□□□ 0.75
SLX4Q8IY92 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLX4Q8IY92 KRT8P37-201ENST00000451609 1420 ntBASIC19.72■□□□□ 0.75
SLX4Q8IY92 RPL13AP20-201ENST00000459725 609 ntBASIC19.72■□□□□ 0.75
SLX4Q8IY92 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SLX4Q8IY92 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SLX4Q8IY92 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLX4Q8IY92 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.71■□□□□ 0.75
SLX4Q8IY92 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SLX4Q8IY92 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLX4Q8IY92 AC060834.1-201ENST00000443027 2032 ntBASIC19.71■□□□□ 0.75
SLX4Q8IY92 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SLX4Q8IY92 AC005622.1-201ENST00000636801 1703 ntBASIC19.71■□□□□ 0.75
SLX4Q8IY92 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLX4Q8IY92 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLX4Q8IY92 PKIG-203ENST00000372887 769 ntTSL 3 BASIC19.71■□□□□ 0.75
SLX4Q8IY92 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.71■□□□□ 0.75
SLX4Q8IY92 GPAA1P2-201ENST00000417923 928 ntBASIC19.71■□□□□ 0.75
SLX4Q8IY92 AC026954.1-201ENST00000429771 1293 ntBASIC19.71■□□□□ 0.75
SLX4Q8IY92 AC012441.1-201ENST00000446669 685 ntBASIC19.71■□□□□ 0.75
SLX4Q8IY92 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.71■□□□□ 0.75
SLX4Q8IY92 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC19.71■□□□□ 0.75
SLX4Q8IY92 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC19.71■□□□□ 0.75
SLX4Q8IY92 KRT90P-201ENST00000549264 1064 ntBASIC19.71■□□□□ 0.75
SLX4Q8IY92 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.71■□□□□ 0.75
SLX4Q8IY92 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.71■□□□□ 0.75
SLX4Q8IY92 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.71■□□□□ 0.75
SLX4Q8IY92 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLX4Q8IY92 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLX4Q8IY92 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLX4Q8IY92 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.71■□□□□ 0.75
SLX4Q8IY92 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLX4Q8IY92 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLX4Q8IY92 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLX4Q8IY92 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLX4Q8IY92 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLX4Q8IY92 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC19.7■□□□□ 0.74
SLX4Q8IY92 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.7■□□□□ 0.74
SLX4Q8IY92 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.7■□□□□ 0.74
SLX4Q8IY92 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.7■□□□□ 0.74
SLX4Q8IY92 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC19.7■□□□□ 0.74
SLX4Q8IY92 AC120045.2-201ENST00000567334 178 ntBASIC19.7■□□□□ 0.74
SLX4Q8IY92 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLX4Q8IY92 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLX4Q8IY92 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.7■□□□□ 0.74
SLX4Q8IY92 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.7■□□□□ 0.74
SLX4Q8IY92 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SLX4Q8IY92 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLX4Q8IY92 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19.7■□□□□ 0.74
SLX4Q8IY92 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLX4Q8IY92 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLX4Q8IY92 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SLX4Q8IY92 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLX4Q8IY92 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLX4Q8IY92 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.69■□□□□ 0.74
SLX4Q8IY92 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLX4Q8IY92 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLX4Q8IY92 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
SLX4Q8IY92 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC19.69■□□□□ 0.74
SLX4Q8IY92 PFN1P12-201ENST00000455938 534 ntBASIC19.69■□□□□ 0.74
SLX4Q8IY92 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.69■□□□□ 0.74
SLX4Q8IY92 RHOQP1-201ENST00000555758 579 ntBASIC19.69■□□□□ 0.74
SLX4Q8IY92 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.69■□□□□ 0.74
SLX4Q8IY92 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC19.69■□□□□ 0.74
SLX4Q8IY92 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLX4Q8IY92 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLX4Q8IY92 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLX4Q8IY92 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.69■□□□□ 0.74
SLX4Q8IY92 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLX4Q8IY92 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLX4Q8IY92 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLX4Q8IY92 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLX4Q8IY92 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLX4Q8IY92 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLX4Q8IY92 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC19.69■□□□□ 0.74
SLX4Q8IY92 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SLX4Q8IY92 AC006033.1-201ENST00000440505 426 ntBASIC19.69■□□□□ 0.74
SLX4Q8IY92 AC245100.5-201ENST00000452108 331 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms