Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 HTR5BP-201ENST00000430851 1154 ntBASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 AC112482.1-201ENST00000492080 688 ntBASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 AL138918.1-201ENST00000568306 659 ntBASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB11FIP4Q86YS3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB11FIP4Q86YS3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RAB11FIP4Q86YS3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.33■□□□□ 0.69
RAB11FIP4Q86YS3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.33■□□□□ 0.69
RAB11FIP4Q86YS3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB11FIP4Q86YS3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB11FIP4Q86YS3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RAB11FIP4Q86YS3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.33■□□□□ 0.69
RAB11FIP4Q86YS3 REXO1L8P-201ENST00000604378 1897 ntBASIC19.33■□□□□ 0.69
RAB11FIP4Q86YS3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RAB11FIP4Q86YS3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB11FIP4Q86YS3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB11FIP4Q86YS3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB11FIP4Q86YS3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
RAB11FIP4Q86YS3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB11FIP4Q86YS3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
RAB11FIP4Q86YS3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
RAB11FIP4Q86YS3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB11FIP4Q86YS3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
RAB11FIP4Q86YS3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 GPX1P2-201ENST00000429271 606 ntBASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 AC112191.1-201ENST00000523689 701 ntBASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB11FIP4Q86YS3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RAB11FIP4Q86YS3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.32■□□□□ 0.68
RAB11FIP4Q86YS3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB11FIP4Q86YS3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.32■□□□□ 0.68
RAB11FIP4Q86YS3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB11FIP4Q86YS3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms