Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 AL592309.1-201ENST00000443127 649 ntBASIC15.82■□□□□ 0.12
RNF44Q7L0R7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 AC069335.1-201ENST00000489972 472 ntBASIC15.82■□□□□ 0.12
RNF44Q7L0R7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 LINC01225-203ENST00000563550 1244 ntBASIC15.82■□□□□ 0.12
RNF44Q7L0R7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 AC027612.4-201ENST00000605371 583 ntBASIC15.82■□□□□ 0.12
RNF44Q7L0R7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 AC008267.7-201ENST00000624570 1194 ntBASIC15.82■□□□□ 0.12
RNF44Q7L0R7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 GGT3P-204ENST00000453783 1664 ntBASIC15.82■□□□□ 0.12
RNF44Q7L0R7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 AL627223.1-201ENST00000416693 442 ntBASIC15.81■□□□□ 0.12
RNF44Q7L0R7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 KRT8P23-201ENST00000560090 1207 ntBASIC15.81■□□□□ 0.12
RNF44Q7L0R7 PRORSD1P-202ENST00000563365 2154 ntBASIC15.81■□□□□ 0.12
RNF44Q7L0R7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF44Q7L0R7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.8■□□□□ 0.12
RNF44Q7L0R7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF44Q7L0R7 AC023141.5-201ENST00000458585 616 ntBASIC15.8■□□□□ 0.12
RNF44Q7L0R7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms