Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 AC136621.1-201ENST00000624017 2304 ntBASIC12.51□□□□□ -0.41
MRPL54Q6P161 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.51□□□□□ -0.41
MRPL54Q6P161 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 GGT3P-204ENST00000453783 1664 ntBASIC12.51□□□□□ -0.41
MRPL54Q6P161 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.5□□□□□ -0.41
MRPL54Q6P161 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.5□□□□□ -0.41
MRPL54Q6P161 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
MRPL54Q6P161 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.5□□□□□ -0.41
MRPL54Q6P161 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.5□□□□□ -0.41
MRPL54Q6P161 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.5□□□□□ -0.41
MRPL54Q6P161 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.5□□□□□ -0.41
MRPL54Q6P161 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
MRPL54Q6P161 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
MRPL54Q6P161 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
MRPL54Q6P161 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
MRPL54Q6P161 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.5□□□□□ -0.41
MRPL54Q6P161 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
MRPL54Q6P161 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC12.5□□□□□ -0.41
MRPL54Q6P161 AC111152.3-201ENST00000569699 673 ntBASIC12.5□□□□□ -0.41
MRPL54Q6P161 DECR2-212ENST00000627716 352 ntTSL 2 BASIC12.5□□□□□ -0.41
MRPL54Q6P161 AC073648.6-201ENST00000641589 218 ntBASIC12.5□□□□□ -0.41
MRPL54Q6P161 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC12.5□□□□□ -0.41
MRPL54Q6P161 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
MRPL54Q6P161 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.5□□□□□ -0.41
MRPL54Q6P161 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 AC097637.2-201ENST00000624096 1997 ntBASIC12.5□□□□□ -0.41
MRPL54Q6P161 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.5□□□□□ -0.41
MRPL54Q6P161 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
MRPL54Q6P161 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
MRPL54Q6P161 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL54Q6P161 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.5□□□□□ -0.41
MRPL54Q6P161 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL54Q6P161 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.49□□□□□ -0.41
MRPL54Q6P161 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms