Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.94■□□□□ 0.3
ALFQ53S48 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ALFQ53S48 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALFQ53S48 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ALFQ53S48 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALFQ53S48 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALFQ53S48 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ALFQ53S48 MIR346-201ENST00000362234 95 ntBASIC16.94■□□□□ 0.3
ALFQ53S48 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALFQ53S48 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.94■□□□□ 0.3
ALFQ53S48 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.94■□□□□ 0.3
ALFQ53S48 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ALFQ53S48 AC142381.1-201ENST00000426099 345 ntBASIC16.94■□□□□ 0.3
ALFQ53S48 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ALFQ53S48 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.94■□□□□ 0.3
ALFQ53S48 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.94■□□□□ 0.3
ALFQ53S48 AC023141.5-201ENST00000458585 616 ntBASIC16.94■□□□□ 0.3
ALFQ53S48 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.94■□□□□ 0.3
ALFQ53S48 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.94■□□□□ 0.3
ALFQ53S48 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALFQ53S48 SLC25A39P2-201ENST00000537614 270 ntBASIC16.94■□□□□ 0.3
ALFQ53S48 KRT8P23-201ENST00000560090 1207 ntBASIC16.94■□□□□ 0.3
ALFQ53S48 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.94■□□□□ 0.3
ALFQ53S48 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.94■□□□□ 0.3
ALFQ53S48 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALFQ53S48 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.94■□□□□ 0.3
ALFQ53S48 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.94■□□□□ 0.3
ALFQ53S48 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALFQ53S48 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.94■□□□□ 0.3
ALFQ53S48 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALFQ53S48 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALFQ53S48 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.94■□□□□ 0.3
ALFQ53S48 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ALFQ53S48 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.94■□□□□ 0.3
ALFQ53S48 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALFQ53S48 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALFQ53S48 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALFQ53S48 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALFQ53S48 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.93■□□□□ 0.3
ALFQ53S48 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
ALFQ53S48 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.93■□□□□ 0.3
ALFQ53S48 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
ALFQ53S48 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.93■□□□□ 0.3
ALFQ53S48 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.93■□□□□ 0.3
ALFQ53S48 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALFQ53S48 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALFQ53S48 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.93■□□□□ 0.3
ALFQ53S48 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.93■□□□□ 0.3
ALFQ53S48 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALFQ53S48 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALFQ53S48 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.93■□□□□ 0.3
ALFQ53S48 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALFQ53S48 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALFQ53S48 AL139400.1-201ENST00000366220 510 ntBASIC16.93■□□□□ 0.3
ALFQ53S48 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.93■□□□□ 0.3
ALFQ53S48 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
ALFQ53S48 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.93■□□□□ 0.3
ALFQ53S48 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ALFQ53S48 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.93■□□□□ 0.3
ALFQ53S48 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.93■□□□□ 0.3
ALFQ53S48 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
ALFQ53S48 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.93■□□□□ 0.3
ALFQ53S48 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.93■□□□□ 0.3
ALFQ53S48 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ALFQ53S48 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.93■□□□□ 0.3
ALFQ53S48 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.93■□□□□ 0.3
ALFQ53S48 AC084121.4-201ENST00000641598 221 ntBASIC16.93■□□□□ 0.3
ALFQ53S48 AF228730.8-201ENST00000642140 221 ntBASIC16.93■□□□□ 0.3
ALFQ53S48 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALFQ53S48 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALFQ53S48 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALFQ53S48 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.93■□□□□ 0.3
ALFQ53S48 AC084018.2-201ENST00000613093 2607 ntBASIC16.93■□□□□ 0.3
ALFQ53S48 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
ALFQ53S48 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALFQ53S48 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.93■□□□□ 0.3
ALFQ53S48 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALFQ53S48 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALFQ53S48 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ALFQ53S48 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.92■□□□□ 0.3
ALFQ53S48 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALFQ53S48 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALFQ53S48 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALFQ53S48 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.92■□□□□ 0.3
ALFQ53S48 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALFQ53S48 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALFQ53S48 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.92■□□□□ 0.3
ALFQ53S48 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ALFQ53S48 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.92■□□□□ 0.3
ALFQ53S48 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALFQ53S48 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.92■□□□□ 0.3
ALFQ53S48 KRT18P32-201ENST00000424695 1287 ntBASIC16.92■□□□□ 0.3
ALFQ53S48 GPS2P2-201ENST00000430745 888 ntBASIC16.92■□□□□ 0.3
ALFQ53S48 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALFQ53S48 AC093724.1-201ENST00000448659 1027 ntBASIC16.92■□□□□ 0.3
ALFQ53S48 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.92■□□□□ 0.3
ALFQ53S48 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALFQ53S48 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.92■□□□□ 0.3
ALFQ53S48 AC105233.2-201ENST00000523697 349 ntBASIC16.92■□□□□ 0.3
ALFQ53S48 AF228730.5-201ENST00000530288 346 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms