Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHROOM1Q2M3G4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHROOM1Q2M3G4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SHROOM1Q2M3G4 AC106886.4-201ENST00000623557 2502 ntBASIC19.08■□□□□ 0.65
SHROOM1Q2M3G4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.08■□□□□ 0.65
SHROOM1Q2M3G4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHROOM1Q2M3G4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 ZNF890P-202ENST00000530367 1156 ntBASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 AL109936.8-201ENST00000641772 604 ntBASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 AC011676.5-201ENST00000624864 2660 ntBASIC19.08■□□□□ 0.64
SHROOM1Q2M3G4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 KRT8P12-202ENST00000472924 1397 ntBASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 AL033527.5-202ENST00000641632 1098 ntBASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 U82695.1-201ENST00000635752 1889 ntBASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHROOM1Q2M3G4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms