Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 TSPY22P-201ENST00000427496 604 ntBASIC13.99□□□□□ -0.17
SSBP1Q04837 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.99□□□□□ -0.17
SSBP1Q04837 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP1Q04837 AC136621.1-201ENST00000624017 2304 ntBASIC13.99□□□□□ -0.17
SSBP1Q04837 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP1Q04837 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.99□□□□□ -0.17
SSBP1Q04837 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP1Q04837 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.99□□□□□ -0.17
SSBP1Q04837 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.99□□□□□ -0.17
SSBP1Q04837 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.99□□□□□ -0.17
SSBP1Q04837 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.99□□□□□ -0.17
SSBP1Q04837 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.99□□□□□ -0.17
SSBP1Q04837 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.99□□□□□ -0.17
SSBP1Q04837 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP1Q04837 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP1Q04837 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP1Q04837 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP1Q04837 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP1Q04837 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SSBP1Q04837 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
SSBP1Q04837 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP1Q04837 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP1Q04837 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.98□□□□□ -0.17
SSBP1Q04837 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP1Q04837 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP1Q04837 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.98□□□□□ -0.17
SSBP1Q04837 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.98□□□□□ -0.17
SSBP1Q04837 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SSBP1Q04837 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP1Q04837 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP1Q04837 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SSBP1Q04837 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP1Q04837 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SSBP1Q04837 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP1Q04837 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.98□□□□□ -0.17
SSBP1Q04837 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.98□□□□□ -0.17
SSBP1Q04837 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SSBP1Q04837 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP1Q04837 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP1Q04837 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
SSBP1Q04837 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP1Q04837 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.98□□□□□ -0.17
SSBP1Q04837 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP1Q04837 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.98□□□□□ -0.17
SSBP1Q04837 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP1Q04837 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.98□□□□□ -0.17
SSBP1Q04837 TSPY15P-201ENST00000457163 923 ntBASIC13.98□□□□□ -0.17
SSBP1Q04837 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.98□□□□□ -0.17
SSBP1Q04837 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.98□□□□□ -0.17
SSBP1Q04837 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP1Q04837 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.98□□□□□ -0.17
SSBP1Q04837 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SSBP1Q04837 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP1Q04837 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SSBP1Q04837 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
SSBP1Q04837 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP1Q04837 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SSBP1Q04837 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP1Q04837 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP1Q04837 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP1Q04837 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP1Q04837 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SSBP1Q04837 AL009178.2-201ENST00000597278 2719 ntBASIC13.98□□□□□ -0.17
SSBP1Q04837 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP1Q04837 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP1Q04837 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.98□□□□□ -0.17
SSBP1Q04837 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP1Q04837 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP1Q04837 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP1Q04837 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.97□□□□□ -0.17
SSBP1Q04837 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP1Q04837 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP1Q04837 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP1Q04837 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
SSBP1Q04837 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP1Q04837 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP1Q04837 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
SSBP1Q04837 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SSBP1Q04837 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP1Q04837 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SSBP1Q04837 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP1Q04837 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP1Q04837 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP1Q04837 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.97□□□□□ -0.17
SSBP1Q04837 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
SSBP1Q04837 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.97□□□□□ -0.17
SSBP1Q04837 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.97□□□□□ -0.17
SSBP1Q04837 LINC01238-205ENST00000567549 1107 ntBASIC13.97□□□□□ -0.17
SSBP1Q04837 MIR4497-201ENST00000583208 89 ntBASIC13.97□□□□□ -0.17
SSBP1Q04837 AL353135.1-201ENST00000606729 504 ntBASIC13.97□□□□□ -0.17
SSBP1Q04837 AC073592.4-201ENST00000623827 446 ntBASIC13.97□□□□□ -0.17
SSBP1Q04837 AP000867.4-201ENST00000641616 219 ntBASIC13.97□□□□□ -0.17
SSBP1Q04837 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP1Q04837 AC131009.4-201ENST00000624048 1740 ntBASIC13.97□□□□□ -0.17
SSBP1Q04837 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP1Q04837 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.97□□□□□ -0.17
SSBP1Q04837 TP73-AS1-210ENST00000637775 1455 ntBASIC13.97□□□□□ -0.17
SSBP1Q04837 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP1Q04837 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP1Q04837 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms