Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 FAM45BP-202ENST00000592932 1624 ntBASIC12.71□□□□□ -0.37
HIST1H1AQ02539 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.71□□□□□ -0.37
HIST1H1AQ02539 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 AL022326.1-202ENST00000641533 845 ntBASIC12.71□□□□□ -0.37
HIST1H1AQ02539 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 HLA-A-202ENST00000376806 1854 ntBASIC12.71□□□□□ -0.37
HIST1H1AQ02539 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC12.71□□□□□ -0.38
HIST1H1AQ02539 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HIST1H1AQ02539 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HIST1H1AQ02539 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.38
HIST1H1AQ02539 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HIST1H1AQ02539 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HIST1H1AQ02539 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
HIST1H1AQ02539 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HIST1H1AQ02539 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC12.71□□□□□ -0.38
HIST1H1AQ02539 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HIST1H1AQ02539 NCF1C-201ENST00000438382 1427 ntBASIC12.71□□□□□ -0.38
HIST1H1AQ02539 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 HNRNPRP1-201ENST00000453465 1695 ntBASIC12.7□□□□□ -0.38
HIST1H1AQ02539 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 AL121772.3-201ENST00000610840 674 ntBASIC12.7□□□□□ -0.38
HIST1H1AQ02539 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 AL139288.1-201ENST00000623748 933 ntBASIC12.7□□□□□ -0.38
HIST1H1AQ02539 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 AL391256.1-201ENST00000443260 1855 ntBASIC12.7□□□□□ -0.38
HIST1H1AQ02539 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms