Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EFNB1P98172 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.73□□□□□ -0.05
EFNB1P98172 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
EFNB1P98172 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
EFNB1P98172 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EFNB1P98172 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
EFNB1P98172 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
EFNB1P98172 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EFNB1P98172 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.73□□□□□ -0.05
EFNB1P98172 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EFNB1P98172 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
EFNB1P98172 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EFNB1P98172 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EFNB1P98172 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
EFNB1P98172 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.73□□□□□ -0.05
EFNB1P98172 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EFNB1P98172 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EFNB1P98172 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
EFNB1P98172 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.72□□□□□ -0.05
EFNB1P98172 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
EFNB1P98172 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
EFNB1P98172 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
EFNB1P98172 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
EFNB1P98172 PKD1P1-201ENST00000458669 6805 ntBASIC14.72□□□□□ -0.05
EFNB1P98172 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
EFNB1P98172 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.72□□□□□ -0.05
EFNB1P98172 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EFNB1P98172 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
EFNB1P98172 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
EFNB1P98172 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.72□□□□□ -0.05
EFNB1P98172 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
EFNB1P98172 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
EFNB1P98172 RPS15P9-201ENST00000494093 319 ntBASIC14.72□□□□□ -0.05
EFNB1P98172 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.72□□□□□ -0.05
EFNB1P98172 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.72□□□□□ -0.05
EFNB1P98172 FOSL1P1-201ENST00000511041 816 ntBASIC14.72□□□□□ -0.05
EFNB1P98172 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.72□□□□□ -0.05
EFNB1P98172 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.72□□□□□ -0.05
EFNB1P98172 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
EFNB1P98172 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.72□□□□□ -0.05
EFNB1P98172 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
EFNB1P98172 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.72□□□□□ -0.05
EFNB1P98172 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EFNB1P98172 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
EFNB1P98172 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
EFNB1P98172 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
EFNB1P98172 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
EFNB1P98172 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
EFNB1P98172 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.72□□□□□ -0.05
EFNB1P98172 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
EFNB1P98172 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
EFNB1P98172 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
EFNB1P98172 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EFNB1P98172 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
EFNB1P98172 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EFNB1P98172 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EFNB1P98172 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EFNB1P98172 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.71□□□□□ -0.05
EFNB1P98172 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
EFNB1P98172 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
EFNB1P98172 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.71□□□□□ -0.05
EFNB1P98172 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
EFNB1P98172 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
EFNB1P98172 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
EFNB1P98172 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
EFNB1P98172 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
EFNB1P98172 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EFNB1P98172 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
EFNB1P98172 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EFNB1P98172 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
EFNB1P98172 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
EFNB1P98172 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
EFNB1P98172 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EFNB1P98172 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
EFNB1P98172 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EFNB1P98172 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.71□□□□□ -0.05
EFNB1P98172 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.71□□□□□ -0.05
EFNB1P98172 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.71□□□□□ -0.05
EFNB1P98172 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.71□□□□□ -0.05
EFNB1P98172 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.71□□□□□ -0.05
EFNB1P98172 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.71□□□□□ -0.05
EFNB1P98172 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EFNB1P98172 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.71□□□□□ -0.05
EFNB1P98172 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.71□□□□□ -0.05
EFNB1P98172 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.71□□□□□ -0.05
EFNB1P98172 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
EFNB1P98172 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.71□□□□□ -0.06
EFNB1P98172 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.71□□□□□ -0.06
EFNB1P98172 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
EFNB1P98172 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
EFNB1P98172 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
EFNB1P98172 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.71□□□□□ -0.06
EFNB1P98172 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.71□□□□□ -0.06
EFNB1P98172 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.71□□□□□ -0.06
EFNB1P98172 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
EFNB1P98172 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
EFNB1P98172 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
EFNB1P98172 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.71□□□□□ -0.06
EFNB1P98172 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
EFNB1P98172 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms