Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H3F3AP84243 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.75□□□□□ -0.05
H3F3AP84243 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
H3F3AP84243 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H3F3AP84243 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H3F3AP84243 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.75□□□□□ -0.05
H3F3AP84243 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
H3F3AP84243 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.74□□□□□ -0.05
H3F3AP84243 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3AP84243 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3AP84243 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3AP84243 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3AP84243 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
H3F3AP84243 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.74□□□□□ -0.05
H3F3AP84243 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3AP84243 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.74□□□□□ -0.05
H3F3AP84243 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
H3F3AP84243 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3AP84243 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3AP84243 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.74□□□□□ -0.05
H3F3AP84243 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.74□□□□□ -0.05
H3F3AP84243 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
H3F3AP84243 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
H3F3AP84243 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.74□□□□□ -0.05
H3F3AP84243 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3AP84243 RN7SL589P-201ENST00000481268 310 ntBASIC14.74□□□□□ -0.05
H3F3AP84243 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.74□□□□□ -0.05
H3F3AP84243 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3AP84243 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
H3F3AP84243 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
H3F3AP84243 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
H3F3AP84243 AC243562.1-201ENST00000560672 389 ntBASIC14.74□□□□□ -0.05
H3F3AP84243 AL135744.1-201ENST00000565098 629 ntBASIC14.74□□□□□ -0.05
H3F3AP84243 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.74□□□□□ -0.05
H3F3AP84243 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.74□□□□□ -0.05
H3F3AP84243 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
H3F3AP84243 AC010327.4-202ENST00000591484 748 ntBASIC14.74□□□□□ -0.05
H3F3AP84243 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.74□□□□□ -0.05
H3F3AP84243 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.74□□□□□ -0.05
H3F3AP84243 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
H3F3AP84243 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3AP84243 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.74□□□□□ -0.05
H3F3AP84243 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3AP84243 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.74□□□□□ -0.05
H3F3AP84243 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.74□□□□□ -0.05
H3F3AP84243 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3AP84243 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3AP84243 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.74□□□□□ -0.05
H3F3AP84243 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3AP84243 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.74□□□□□ -0.05
H3F3AP84243 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.74□□□□□ -0.05
H3F3AP84243 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3AP84243 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3AP84243 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3AP84243 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
H3F3AP84243 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.73□□□□□ -0.05
H3F3AP84243 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.73□□□□□ -0.05
H3F3AP84243 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3AP84243 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
H3F3AP84243 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3AP84243 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3AP84243 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
H3F3AP84243 AC073439.1-201ENST00000624121 1774 ntBASIC14.73□□□□□ -0.05
H3F3AP84243 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3AP84243 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
H3F3AP84243 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3AP84243 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.73□□□□□ -0.05
H3F3AP84243 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3AP84243 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.73□□□□□ -0.05
H3F3AP84243 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3AP84243 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3AP84243 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3AP84243 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.73□□□□□ -0.05
H3F3AP84243 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3AP84243 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3AP84243 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3AP84243 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.73□□□□□ -0.05
H3F3AP84243 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
H3F3AP84243 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.73□□□□□ -0.05
H3F3AP84243 AC093724.1-201ENST00000448659 1027 ntBASIC14.73□□□□□ -0.05
H3F3AP84243 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.73□□□□□ -0.05
H3F3AP84243 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.73□□□□□ -0.05
H3F3AP84243 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.73□□□□□ -0.05
H3F3AP84243 AC092865.5-201ENST00000545435 363 ntBASIC14.73□□□□□ -0.05
H3F3AP84243 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3AP84243 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.73□□□□□ -0.05
H3F3AP84243 AC073389.1-201ENST00000595595 795 ntBASIC14.73□□□□□ -0.05
H3F3AP84243 AC026120.1-201ENST00000611536 926 ntBASIC14.73□□□□□ -0.05
H3F3AP84243 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.73□□□□□ -0.05
H3F3AP84243 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3AP84243 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.73□□□□□ -0.05
H3F3AP84243 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.73□□□□□ -0.05
H3F3AP84243 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3AP84243 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3AP84243 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3AP84243 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3AP84243 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3AP84243 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.73□□□□□ -0.05
H3F3AP84243 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.73□□□□□ -0.05
H3F3AP84243 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms