Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PER3P56645 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.36■□□□□ 0.05
PER3P56645 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.36■□□□□ 0.05
PER3P56645 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.36■□□□□ 0.05
PER3P56645 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.36■□□□□ 0.05
PER3P56645 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PER3P56645 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PER3P56645 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PER3P56645 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PER3P56645 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PER3P56645 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PER3P56645 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
PER3P56645 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PER3P56645 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PER3P56645 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.35■□□□□ 0.05
PER3P56645 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.35■□□□□ 0.05
PER3P56645 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.35■□□□□ 0.05
PER3P56645 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PER3P56645 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.35■□□□□ 0.05
PER3P56645 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PER3P56645 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PER3P56645 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PER3P56645 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PER3P56645 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.35■□□□□ 0.05
PER3P56645 AL627223.1-201ENST00000416693 442 ntBASIC15.35■□□□□ 0.05
PER3P56645 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PER3P56645 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.35■□□□□ 0.05
PER3P56645 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PER3P56645 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.35■□□□□ 0.05
PER3P56645 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.35■□□□□ 0.05
PER3P56645 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.35■□□□□ 0.05
PER3P56645 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PER3P56645 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.35■□□□□ 0.05
PER3P56645 AC026120.1-201ENST00000611536 926 ntBASIC15.35■□□□□ 0.05
PER3P56645 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
PER3P56645 AC006116.8-202ENST00000587620 1550 ntBASIC15.35■□□□□ 0.05
PER3P56645 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PER3P56645 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PER3P56645 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.35■□□□□ 0.05
PER3P56645 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PER3P56645 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
PER3P56645 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PER3P56645 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PER3P56645 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
PER3P56645 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PER3P56645 AL135999.2-201ENST00000622438 1686 ntBASIC15.35■□□□□ 0.05
PER3P56645 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PER3P56645 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PER3P56645 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PER3P56645 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PER3P56645 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
PER3P56645 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PER3P56645 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PER3P56645 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.34■□□□□ 0.05
PER3P56645 AC023824.1-201ENST00000562945 2975 ntBASIC15.34■□□□□ 0.05
PER3P56645 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PER3P56645 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PER3P56645 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.34■□□□□ 0.05
PER3P56645 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.34■□□□□ 0.05
PER3P56645 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PER3P56645 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PER3P56645 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.34■□□□□ 0.05
PER3P56645 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.34■□□□□ 0.05
PER3P56645 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.34■□□□□ 0.05
PER3P56645 SPDYE11-202ENST00000450699 704 ntBASIC15.34■□□□□ 0.05
PER3P56645 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PER3P56645 RN7SL589P-201ENST00000481268 310 ntBASIC15.34■□□□□ 0.05
PER3P56645 SPDYE9P-201ENST00000570642 692 ntBASIC15.34■□□□□ 0.05
PER3P56645 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.34■□□□□ 0.05
PER3P56645 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.34■□□□□ 0.05
PER3P56645 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.34■□□□□ 0.05
PER3P56645 AC012645.4-201ENST00000610691 1061 ntBASIC15.34■□□□□ 0.05
PER3P56645 SPDYE10P-202ENST00000612005 668 ntBASIC15.34■□□□□ 0.05
PER3P56645 SPDYE8P-202ENST00000612377 668 ntBASIC15.34■□□□□ 0.05
PER3P56645 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.34■□□□□ 0.05
PER3P56645 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
PER3P56645 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PER3P56645 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PER3P56645 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PER3P56645 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PER3P56645 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
PER3P56645 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.34■□□□□ 0.05
PER3P56645 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PER3P56645 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PER3P56645 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PER3P56645 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.34■□□□□ 0.05
PER3P56645 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PER3P56645 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
PER3P56645 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.33■□□□□ 0.05
PER3P56645 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
PER3P56645 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PER3P56645 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.33■□□□□ 0.05
PER3P56645 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
PER3P56645 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PER3P56645 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PER3P56645 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.33■□□□□ 0.04
PER3P56645 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PER3P56645 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.33■□□□□ 0.04
PER3P56645 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PER3P56645 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms