Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 BRWD1P1-201ENST00000401091 371 ntBASIC18.08■□□□□ 0.48
ATN1P54259 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATN1P54259 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATN1P54259 SPDYE17-201ENST00000412399 783 ntBASIC18.08■□□□□ 0.48
ATN1P54259 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC18.08■□□□□ 0.48
ATN1P54259 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.08■□□□□ 0.48
ATN1P54259 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.08■□□□□ 0.48
ATN1P54259 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATN1P54259 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.08■□□□□ 0.48
ATN1P54259 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.08■□□□□ 0.48
ATN1P54259 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.08■□□□□ 0.48
ATN1P54259 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
ATN1P54259 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
ATN1P54259 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATN1P54259 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATN1P54259 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.08■□□□□ 0.48
ATN1P54259 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATN1P54259 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATN1P54259 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATN1P54259 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
ATN1P54259 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATN1P54259 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.08■□□□□ 0.48
ATN1P54259 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATN1P54259 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATN1P54259 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATN1P54259 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
ATN1P54259 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATN1P54259 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATN1P54259 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATN1P54259 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATN1P54259 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ATN1P54259 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.07■□□□□ 0.48
ATN1P54259 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.07■□□□□ 0.48
ATN1P54259 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ATN1P54259 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATN1P54259 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATN1P54259 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATN1P54259 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATN1P54259 AC093525.8-201ENST00000624099 1342 ntBASIC18.07■□□□□ 0.48
ATN1P54259 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
ATN1P54259 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATN1P54259 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATN1P54259 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATN1P54259 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATN1P54259 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.07■□□□□ 0.48
ATN1P54259 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC18.07■□□□□ 0.48
ATN1P54259 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.07■□□□□ 0.48
ATN1P54259 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATN1P54259 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.07■□□□□ 0.48
ATN1P54259 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.07■□□□□ 0.48
ATN1P54259 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.07■□□□□ 0.48
ATN1P54259 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.07■□□□□ 0.48
ATN1P54259 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC18.07■□□□□ 0.48
ATN1P54259 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.07■□□□□ 0.48
ATN1P54259 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC18.07■□□□□ 0.48
ATN1P54259 BICD1-207ENST00000551848 1962 ntBASIC18.07■□□□□ 0.48
ATN1P54259 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATN1P54259 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATN1P54259 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATN1P54259 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
ATN1P54259 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATN1P54259 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ATN1P54259 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.07■□□□□ 0.48
ATN1P54259 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATN1P54259 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATN1P54259 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ATN1P54259 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.06■□□□□ 0.48
ATN1P54259 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATN1P54259 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATN1P54259 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ATN1P54259 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ATN1P54259 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.06■□□□□ 0.48
ATN1P54259 AC116353.5-201ENST00000638148 1699 ntBASIC18.06■□□□□ 0.48
ATN1P54259 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATN1P54259 AC006277.1-201ENST00000624348 1610 ntBASIC18.06■□□□□ 0.48
ATN1P54259 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
ATN1P54259 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATN1P54259 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.06■□□□□ 0.48
ATN1P54259 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATN1P54259 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ATN1P54259 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATN1P54259 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ATN1P54259 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.06■□□□□ 0.48
ATN1P54259 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.06■□□□□ 0.48
ATN1P54259 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.06■□□□□ 0.48
ATN1P54259 AC007919.2-201ENST00000444110 511 ntBASIC18.06■□□□□ 0.48
ATN1P54259 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATN1P54259 USP32P1-208ENST00000506594 1164 ntBASIC18.06■□□□□ 0.48
ATN1P54259 AC104596.2-201ENST00000512793 793 ntBASIC18.06■□□□□ 0.48
ATN1P54259 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.06■□□□□ 0.48
ATN1P54259 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.06■□□□□ 0.48
ATN1P54259 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATN1P54259 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.06■□□□□ 0.48
ATN1P54259 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.06■□□□□ 0.48
ATN1P54259 KRT8P2-201ENST00000556193 944 ntBASIC18.06■□□□□ 0.48
ATN1P54259 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.06■□□□□ 0.48
ATN1P54259 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.06■□□□□ 0.48
ATN1P54259 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATN1P54259 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.06■□□□□ 0.48
ATN1P54259 AC090950.1-202ENST00000605733 644 ntBASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms