Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.5□□□□□ -0.25
CEACAM3P40198 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.49□□□□□ -0.25
CEACAM3P40198 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CEACAM3P40198 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CEACAM3P40198 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.49□□□□□ -0.25
CEACAM3P40198 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.49□□□□□ -0.25
CEACAM3P40198 HLA-A-202ENST00000376806 1854 ntBASIC13.49□□□□□ -0.25
CEACAM3P40198 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
CEACAM3P40198 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CEACAM3P40198 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CEACAM3P40198 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.49□□□□□ -0.25
CEACAM3P40198 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.49□□□□□ -0.25
CEACAM3P40198 KRT18P34-201ENST00000488218 1270 ntBASIC13.49□□□□□ -0.25
CEACAM3P40198 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.49□□□□□ -0.25
CEACAM3P40198 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 PGAM5P1-201ENST00000518923 814 ntBASIC13.49□□□□□ -0.25
CEACAM3P40198 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.49□□□□□ -0.25
CEACAM3P40198 FAM86C2P-203ENST00000528684 1004 ntBASIC13.49□□□□□ -0.25
CEACAM3P40198 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
CEACAM3P40198 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.49□□□□□ -0.25
CEACAM3P40198 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.49□□□□□ -0.25
CEACAM3P40198 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
CEACAM3P40198 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CEACAM3P40198 C20orf181-201ENST00000623918 480 ntBASIC13.49□□□□□ -0.25
CEACAM3P40198 AC092865.6-201ENST00000642101 219 ntBASIC13.49□□□□□ -0.25
CEACAM3P40198 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.49□□□□□ -0.25
CEACAM3P40198 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.49□□□□□ -0.25
CEACAM3P40198 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.49□□□□□ -0.25
CEACAM3P40198 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.49□□□□□ -0.25
CEACAM3P40198 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CEACAM3P40198 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CEACAM3P40198 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CEACAM3P40198 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.48□□□□□ -0.25
CEACAM3P40198 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.48□□□□□ -0.25
CEACAM3P40198 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.48□□□□□ -0.25
CEACAM3P40198 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CEACAM3P40198 PCDHA12-202ENST00000613593 2588 ntBASIC13.48□□□□□ -0.25
CEACAM3P40198 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CEACAM3P40198 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CEACAM3P40198 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.48□□□□□ -0.25
CEACAM3P40198 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CEACAM3P40198 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CEACAM3P40198 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CEACAM3P40198 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CEACAM3P40198 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CEACAM3P40198 BX842568.4-201ENST00000421222 227 ntBASIC13.48□□□□□ -0.25
CEACAM3P40198 AP000347.1-202ENST00000435868 847 ntBASIC13.48□□□□□ -0.25
CEACAM3P40198 MKNK2P1-201ENST00000437526 628 ntBASIC13.48□□□□□ -0.25
CEACAM3P40198 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.48□□□□□ -0.25
CEACAM3P40198 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.48□□□□□ -0.25
CEACAM3P40198 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CEACAM3P40198 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CEACAM3P40198 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.48□□□□□ -0.25
CEACAM3P40198 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CEACAM3P40198 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.48□□□□□ -0.25
CEACAM3P40198 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.48□□□□□ -0.25
CEACAM3P40198 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CEACAM3P40198 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.48□□□□□ -0.25
CEACAM3P40198 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CEACAM3P40198 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CEACAM3P40198 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CEACAM3P40198 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CEACAM3P40198 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CEACAM3P40198 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CEACAM3P40198 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CEACAM3P40198 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CEACAM3P40198 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.47□□□□□ -0.25
CEACAM3P40198 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
CEACAM3P40198 AL671710.1-201ENST00000610245 2349 ntBASIC13.47□□□□□ -0.25
CEACAM3P40198 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.47□□□□□ -0.25
CEACAM3P40198 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CEACAM3P40198 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CEACAM3P40198 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.47□□□□□ -0.25
CEACAM3P40198 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CEACAM3P40198 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CEACAM3P40198 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CEACAM3P40198 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms