Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFX1P22670 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFX1P22670 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFX1P22670 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFX1P22670 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.96■□□□□ 0.47
RFX1P22670 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RFX1P22670 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.96■□□□□ 0.47
RFX1P22670 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.96■□□□□ 0.47
RFX1P22670 OR7E47P-204ENST00000575924 449 ntBASIC17.96■□□□□ 0.47
RFX1P22670 MIR4745-201ENST00000577608 62 ntBASIC17.96■□□□□ 0.47
RFX1P22670 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.96■□□□□ 0.47
RFX1P22670 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.96■□□□□ 0.47
RFX1P22670 AC020765.3-201ENST00000613051 740 ntBASIC17.96■□□□□ 0.47
RFX1P22670 AC010507.1-201ENST00000633895 436 ntBASIC17.96■□□□□ 0.47
RFX1P22670 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.96■□□□□ 0.47
RFX1P22670 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFX1P22670 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RFX1P22670 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.96■□□□□ 0.47
RFX1P22670 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFX1P22670 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RFX1P22670 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFX1P22670 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RFX1P22670 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFX1P22670 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.96■□□□□ 0.47
RFX1P22670 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RFX1P22670 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.96■□□□□ 0.47
RFX1P22670 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RFX1P22670 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RFX1P22670 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.95■□□□□ 0.46
RFX1P22670 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFX1P22670 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFX1P22670 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFX1P22670 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.95■□□□□ 0.46
RFX1P22670 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFX1P22670 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFX1P22670 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFX1P22670 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFX1P22670 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFX1P22670 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.95■□□□□ 0.46
RFX1P22670 FLJ16779-201ENST00000612722 7638 ntBASIC17.95■□□□□ 0.46
RFX1P22670 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.95■□□□□ 0.46
RFX1P22670 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RFX1P22670 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.95■□□□□ 0.46
RFX1P22670 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.95■□□□□ 0.46
RFX1P22670 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RFX1P22670 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RFX1P22670 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFX1P22670 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFX1P22670 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFX1P22670 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RFX1P22670 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.95■□□□□ 0.46
RFX1P22670 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.95■□□□□ 0.46
RFX1P22670 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.95■□□□□ 0.46
RFX1P22670 KRT19P2-202ENST00000557173 1012 ntBASIC17.95■□□□□ 0.46
RFX1P22670 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RFX1P22670 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.95■□□□□ 0.46
RFX1P22670 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.95■□□□□ 0.46
RFX1P22670 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.95■□□□□ 0.46
RFX1P22670 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.95■□□□□ 0.46
RFX1P22670 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.95■□□□□ 0.46
RFX1P22670 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
RFX1P22670 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFX1P22670 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFX1P22670 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFX1P22670 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFX1P22670 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RFX1P22670 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFX1P22670 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RFX1P22670 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RFX1P22670 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RFX1P22670 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RFX1P22670 PCGF3-213ENST00000620529 1899 ntBASIC17.95■□□□□ 0.46
RFX1P22670 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.95■□□□□ 0.46
RFX1P22670 AL391005.1-201ENST00000623953 2435 ntBASIC17.94■□□□□ 0.46
RFX1P22670 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
RFX1P22670 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX1P22670 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFX1P22670 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFX1P22670 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.94■□□□□ 0.46
RFX1P22670 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFX1P22670 AC012569.1-201ENST00000591191 1524 ntBASIC17.94■□□□□ 0.46
RFX1P22670 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX1P22670 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX1P22670 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RFX1P22670 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFX1P22670 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX1P22670 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX1P22670 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RFX1P22670 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFX1P22670 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.94■□□□□ 0.46
RFX1P22670 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.94■□□□□ 0.46
RFX1P22670 FAM185BP-201ENST00000443595 716 ntBASIC17.94■□□□□ 0.46
RFX1P22670 AC074386.1-202ENST00000463561 864 ntBASIC17.94■□□□□ 0.46
RFX1P22670 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.94■□□□□ 0.46
RFX1P22670 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.94■□□□□ 0.46
RFX1P22670 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.94■□□□□ 0.46
RFX1P22670 MIR3909-201ENST00000579518 119 ntBASIC17.94■□□□□ 0.46
RFX1P22670 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.94■□□□□ 0.46
RFX1P22670 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX1P22670 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms