Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN3P20807 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN3P20807 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CAPN3P20807 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
CAPN3P20807 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.93■□□□□ 0.14
CAPN3P20807 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CAPN3P20807 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
CAPN3P20807 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN3P20807 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN3P20807 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN3P20807 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN3P20807 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN3P20807 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.93■□□□□ 0.14
CAPN3P20807 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.93■□□□□ 0.14
CAPN3P20807 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.93■□□□□ 0.14
CAPN3P20807 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN3P20807 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN3P20807 AC139887.3-201ENST00000568585 713 ntBASIC15.93■□□□□ 0.14
CAPN3P20807 MIR5100-201ENST00000579544 119 ntBASIC15.93■□□□□ 0.14
CAPN3P20807 AC140113.2-201ENST00000604370 208 ntBASIC15.93■□□□□ 0.14
CAPN3P20807 AL139424.1-201ENST00000607572 797 ntBASIC15.93■□□□□ 0.14
CAPN3P20807 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN3P20807 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CAPN3P20807 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN3P20807 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN3P20807 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN3P20807 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN3P20807 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN3P20807 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN3P20807 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.93■□□□□ 0.14
CAPN3P20807 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN3P20807 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN3P20807 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN3P20807 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN3P20807 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CAPN3P20807 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.92■□□□□ 0.14
CAPN3P20807 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.92■□□□□ 0.14
CAPN3P20807 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN3P20807 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.92■□□□□ 0.14
CAPN3P20807 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN3P20807 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN3P20807 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
CAPN3P20807 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN3P20807 PMS2P2-201ENST00000425039 1128 ntBASIC15.92■□□□□ 0.14
CAPN3P20807 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
CAPN3P20807 PAWRP1-201ENST00000451083 565 ntBASIC15.92■□□□□ 0.14
CAPN3P20807 PRYP5-201ENST00000451909 266 ntBASIC15.92■□□□□ 0.14
CAPN3P20807 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.92■□□□□ 0.14
CAPN3P20807 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.92■□□□□ 0.14
CAPN3P20807 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.92■□□□□ 0.14
CAPN3P20807 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN3P20807 AP001269.4-201ENST00000609611 512 ntBASIC15.92■□□□□ 0.14
CAPN3P20807 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.92■□□□□ 0.14
CAPN3P20807 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.92■□□□□ 0.14
CAPN3P20807 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN3P20807 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN3P20807 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
CAPN3P20807 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.92■□□□□ 0.14
CAPN3P20807 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.92■□□□□ 0.14
CAPN3P20807 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN3P20807 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CAPN3P20807 NCF1C-201ENST00000438382 1427 ntBASIC15.92■□□□□ 0.14
CAPN3P20807 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN3P20807 FER1L4-210ENST00000615531 5998 ntBASIC15.92■□□□□ 0.14
CAPN3P20807 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN3P20807 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.92■□□□□ 0.14
CAPN3P20807 AP005117.1-202ENST00000581724 1908 ntBASIC15.92■□□□□ 0.14
CAPN3P20807 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN3P20807 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN3P20807 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CAPN3P20807 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN3P20807 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN3P20807 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CAPN3P20807 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN3P20807 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.91■□□□□ 0.14
CAPN3P20807 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN3P20807 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN3P20807 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.91■□□□□ 0.14
CAPN3P20807 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.91■□□□□ 0.14
CAPN3P20807 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.91■□□□□ 0.14
CAPN3P20807 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN3P20807 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CAPN3P20807 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.91■□□□□ 0.14
CAPN3P20807 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.91■□□□□ 0.14
CAPN3P20807 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN3P20807 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.91■□□□□ 0.14
CAPN3P20807 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN3P20807 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CAPN3P20807 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CAPN3P20807 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN3P20807 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN3P20807 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.91■□□□□ 0.14
CAPN3P20807 MIR940-201ENST00000401276 94 ntBASIC15.91■□□□□ 0.14
CAPN3P20807 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.91■□□□□ 0.14
CAPN3P20807 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.91■□□□□ 0.14
CAPN3P20807 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CAPN3P20807 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.91■□□□□ 0.14
CAPN3P20807 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.91■□□□□ 0.14
CAPN3P20807 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.91■□□□□ 0.14
CAPN3P20807 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms