Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TOP1P11387 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.37■□□□□ 0.69
TOP1P11387 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TOP1P11387 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.37■□□□□ 0.69
TOP1P11387 AC109322.1-201ENST00000524499 1264 ntBASIC19.37■□□□□ 0.69
TOP1P11387 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.37■□□□□ 0.69
TOP1P11387 LINC00628-201ENST00000628516 1289 ntBASIC19.37■□□□□ 0.69
TOP1P11387 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOP1P11387 RNF216P1-203ENST00000404404 2427 ntBASIC19.37■□□□□ 0.69
TOP1P11387 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOP1P11387 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOP1P11387 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.37■□□□□ 0.69
TOP1P11387 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOP1P11387 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOP1P11387 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TOP1P11387 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.37■□□□□ 0.69
TOP1P11387 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.37■□□□□ 0.69
TOP1P11387 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.37■□□□□ 0.69
TOP1P11387 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOP1P11387 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TOP1P11387 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.36■□□□□ 0.69
TOP1P11387 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOP1P11387 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.36■□□□□ 0.69
TOP1P11387 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.36■□□□□ 0.69
TOP1P11387 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.36■□□□□ 0.69
TOP1P11387 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOP1P11387 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOP1P11387 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOP1P11387 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOP1P11387 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
TOP1P11387 AL031731.1-201ENST00000642131 2094 ntBASIC19.36■□□□□ 0.69
TOP1P11387 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOP1P11387 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOP1P11387 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.36■□□□□ 0.69
TOP1P11387 GPS2P2-201ENST00000430745 888 ntBASIC19.36■□□□□ 0.69
TOP1P11387 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.36■□□□□ 0.69
TOP1P11387 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.36■□□□□ 0.69
TOP1P11387 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.36■□□□□ 0.69
TOP1P11387 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TOP1P11387 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.36■□□□□ 0.69
TOP1P11387 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.36■□□□□ 0.69
TOP1P11387 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.36■□□□□ 0.69
TOP1P11387 AC073389.1-201ENST00000595595 795 ntBASIC19.36■□□□□ 0.69
TOP1P11387 AC093028.1-201ENST00000622998 982 ntBASIC19.36■□□□□ 0.69
TOP1P11387 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TOP1P11387 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOP1P11387 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOP1P11387 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOP1P11387 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOP1P11387 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TOP1P11387 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.36■□□□□ 0.69
TOP1P11387 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOP1P11387 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TOP1P11387 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TOP1P11387 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TOP1P11387 FLJ38576-201ENST00000623820 2459 ntBASIC19.35■□□□□ 0.69
TOP1P11387 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.35■□□□□ 0.69
TOP1P11387 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TOP1P11387 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TOP1P11387 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TOP1P11387 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TOP1P11387 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TOP1P11387 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TOP1P11387 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
TOP1P11387 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TOP1P11387 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.35■□□□□ 0.69
TOP1P11387 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TOP1P11387 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TOP1P11387 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.35■□□□□ 0.69
TOP1P11387 PRYP6-201ENST00000514804 343 ntBASIC19.35■□□□□ 0.69
TOP1P11387 AC105233.2-201ENST00000523697 349 ntBASIC19.35■□□□□ 0.69
TOP1P11387 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TOP1P11387 AF228730.5-201ENST00000530288 346 ntBASIC19.35■□□□□ 0.69
TOP1P11387 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TOP1P11387 SLC25A39P2-201ENST00000537614 270 ntBASIC19.35■□□□□ 0.69
TOP1P11387 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.35■□□□□ 0.69
TOP1P11387 AC004449.1-201ENST00000564240 433 ntBASIC19.35■□□□□ 0.69
TOP1P11387 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TOP1P11387 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.35■□□□□ 0.69
TOP1P11387 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.35■□□□□ 0.69
TOP1P11387 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TOP1P11387 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TOP1P11387 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TOP1P11387 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TOP1P11387 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.35■□□□□ 0.69
TOP1P11387 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TOP1P11387 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TOP1P11387 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TOP1P11387 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.35■□□□□ 0.69
TOP1P11387 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
TOP1P11387 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TOP1P11387 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TOP1P11387 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TOP1P11387 GPAA1P2-202ENST00000606848 1787 ntBASIC19.34■□□□□ 0.69
TOP1P11387 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TOP1P11387 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TOP1P11387 GGT4P-201ENST00000623672 1708 ntBASIC19.34■□□□□ 0.69
TOP1P11387 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TOP1P11387 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TOP1P11387 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms