Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 HMGA1P7-201ENST00000406908 502 ntBASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 HCG4-201ENST00000418983 998 ntBASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 ADH5P3-201ENST00000433842 1137 ntBASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 KRT8P48-201ENST00000515599 1220 ntBASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 IGHV3-62-201ENST00000520057 340 ntBASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 AC109322.1-201ENST00000524499 1264 ntBASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 AC099522.2-201ENST00000607001 744 ntBASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 PAX6-247ENST00000638965 979 ntTSL 5 BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 MST1L-201ENST00000442552 2185 ntBASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 SLC25A1P3-201ENST00000395415 828 ntBASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 KRT18P32-201ENST00000424695 1287 ntBASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 AC079140.1-201ENST00000508039 487 ntBASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 AL135744.1-201ENST00000565098 629 ntBASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 AC009093.7-201ENST00000623853 1223 ntBASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 AP001350.2-201ENST00000625104 1094 ntBASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
CCNYL3P0C7X3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCNYL3P0C7X3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCNYL3P0C7X3 AC092053.1-201ENST00000605787 1936 ntBASIC15.96■□□□□ 0.14
CCNYL3P0C7X3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.95■□□□□ 0.14
CCNYL3P0C7X3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCNYL3P0C7X3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCNYL3P0C7X3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms