Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PDGFBP01127 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.37■□□□□ 0.21
PDGFBP01127 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.37■□□□□ 0.21
PDGFBP01127 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.37■□□□□ 0.21
PDGFBP01127 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFBP01127 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFBP01127 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.37■□□□□ 0.21
PDGFBP01127 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFBP01127 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFBP01127 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFBP01127 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFBP01127 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFBP01127 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFBP01127 KRT8P39-201ENST00000396270 1433 ntBASIC16.36■□□□□ 0.21
PDGFBP01127 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFBP01127 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFBP01127 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFBP01127 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PDGFBP01127 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFBP01127 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PDGFBP01127 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
PDGFBP01127 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFBP01127 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PDGFBP01127 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
PDGFBP01127 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
PDGFBP01127 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.36■□□□□ 0.21
PDGFBP01127 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
PDGFBP01127 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFBP01127 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.36■□□□□ 0.21
PDGFBP01127 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFBP01127 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFBP01127 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFBP01127 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.36■□□□□ 0.21
PDGFBP01127 AC105129.2-201ENST00000559536 390 ntBASIC16.36■□□□□ 0.21
PDGFBP01127 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.36■□□□□ 0.21
PDGFBP01127 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.36■□□□□ 0.21
PDGFBP01127 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.36■□□□□ 0.21
PDGFBP01127 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
PDGFBP01127 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFBP01127 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFBP01127 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.36■□□□□ 0.21
PDGFBP01127 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFBP01127 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFBP01127 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PDGFBP01127 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFBP01127 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFBP01127 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFBP01127 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFBP01127 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFBP01127 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFBP01127 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFBP01127 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFBP01127 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFBP01127 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PDGFBP01127 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PDGFBP01127 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.35■□□□□ 0.21
PDGFBP01127 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFBP01127 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFBP01127 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
PDGFBP01127 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PDGFBP01127 AC009113.1-201ENST00000570267 2443 ntBASIC16.35■□□□□ 0.21
PDGFBP01127 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFBP01127 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFBP01127 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFBP01127 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFBP01127 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PDGFBP01127 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFBP01127 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.35■□□□□ 0.21
PDGFBP01127 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFBP01127 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.35■□□□□ 0.21
PDGFBP01127 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.35■□□□□ 0.21
PDGFBP01127 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.35■□□□□ 0.21
PDGFBP01127 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
PDGFBP01127 AC106760.1-201ENST00000508690 800 ntBASIC16.35■□□□□ 0.21
PDGFBP01127 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.35■□□□□ 0.21
PDGFBP01127 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.35■□□□□ 0.21
PDGFBP01127 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.35■□□□□ 0.21
PDGFBP01127 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.35■□□□□ 0.21
PDGFBP01127 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.35■□□□□ 0.21
PDGFBP01127 AC015967.2-201ENST00000624092 234 ntBASIC16.35■□□□□ 0.21
PDGFBP01127 AC006435.4-201ENST00000625037 234 ntBASIC16.35■□□□□ 0.21
PDGFBP01127 AL356737.1-201ENST00000634391 234 ntBASIC16.35■□□□□ 0.21
PDGFBP01127 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFBP01127 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.35■□□□□ 0.21
PDGFBP01127 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFBP01127 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.35■□□□□ 0.21
PDGFBP01127 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PDGFBP01127 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PDGFBP01127 AC020763.4-201ENST00000623414 4170 ntBASIC16.35■□□□□ 0.21
PDGFBP01127 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFBP01127 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.35■□□□□ 0.21
PDGFBP01127 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.35■□□□□ 0.21
PDGFBP01127 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDGFBP01127 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.35■□□□□ 0.21
PDGFBP01127 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFBP01127 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.34■□□□□ 0.21
PDGFBP01127 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFBP01127 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFBP01127 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
PDGFBP01127 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms