Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.45■□□□□ 0.54
GGPS1O95749 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
GGPS1O95749 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GGPS1O95749 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GGPS1O95749 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GGPS1O95749 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.45■□□□□ 0.54
GGPS1O95749 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GGPS1O95749 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GGPS1O95749 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
GGPS1O95749 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GGPS1O95749 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
GGPS1O95749 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
GGPS1O95749 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GGPS1O95749 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.45■□□□□ 0.54
GGPS1O95749 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GGPS1O95749 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GGPS1O95749 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.45■□□□□ 0.54
GGPS1O95749 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.45■□□□□ 0.54
GGPS1O95749 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.45■□□□□ 0.54
GGPS1O95749 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.45■□□□□ 0.54
GGPS1O95749 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.45■□□□□ 0.54
GGPS1O95749 BANF1P1-201ENST00000553684 263 ntBASIC18.45■□□□□ 0.54
GGPS1O95749 RN7SL828P-201ENST00000607615 303 ntBASIC18.45■□□□□ 0.54
GGPS1O95749 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
GGPS1O95749 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GGPS1O95749 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
GGPS1O95749 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GGPS1O95749 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GGPS1O95749 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GGPS1O95749 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
GGPS1O95749 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GGPS1O95749 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GGPS1O95749 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.45■□□□□ 0.54
GGPS1O95749 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
GGPS1O95749 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.45■□□□□ 0.54
GGPS1O95749 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GGPS1O95749 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GGPS1O95749 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GGPS1O95749 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.45■□□□□ 0.54
GGPS1O95749 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.44■□□□□ 0.54
GGPS1O95749 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GGPS1O95749 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.44■□□□□ 0.54
GGPS1O95749 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
GGPS1O95749 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
GGPS1O95749 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GGPS1O95749 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GGPS1O95749 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.44■□□□□ 0.54
GGPS1O95749 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GGPS1O95749 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
GGPS1O95749 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
GGPS1O95749 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.44■□□□□ 0.54
GGPS1O95749 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.44■□□□□ 0.54
GGPS1O95749 PKD1P1-201ENST00000458669 6805 ntBASIC18.44■□□□□ 0.54
GGPS1O95749 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
GGPS1O95749 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GGPS1O95749 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GGPS1O95749 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GGPS1O95749 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
GGPS1O95749 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GGPS1O95749 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.44■□□□□ 0.54
GGPS1O95749 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.44■□□□□ 0.54
GGPS1O95749 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.44■□□□□ 0.54
GGPS1O95749 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.44■□□□□ 0.54
GGPS1O95749 AC105021.1-202ENST00000570572 669 ntBASIC18.44■□□□□ 0.54
GGPS1O95749 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.44■□□□□ 0.54
GGPS1O95749 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.44■□□□□ 0.54
GGPS1O95749 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GGPS1O95749 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GGPS1O95749 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GGPS1O95749 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.44■□□□□ 0.54
GGPS1O95749 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GGPS1O95749 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.44■□□□□ 0.54
GGPS1O95749 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GGPS1O95749 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
GGPS1O95749 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GGPS1O95749 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
GGPS1O95749 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.43■□□□□ 0.54
GGPS1O95749 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
GGPS1O95749 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GGPS1O95749 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.43■□□□□ 0.54
GGPS1O95749 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.43■□□□□ 0.54
GGPS1O95749 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GGPS1O95749 AC006538.1-201ENST00000567905 1585 ntBASIC18.43■□□□□ 0.54
GGPS1O95749 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.43■□□□□ 0.54
GGPS1O95749 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
GGPS1O95749 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GGPS1O95749 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
GGPS1O95749 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.43■□□□□ 0.54
GGPS1O95749 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GGPS1O95749 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.43■□□□□ 0.54
GGPS1O95749 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GGPS1O95749 AC190387.1-201ENST00000551683 408 ntBASIC18.43■□□□□ 0.54
GGPS1O95749 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.43■□□□□ 0.54
GGPS1O95749 AL589739.1-201ENST00000607720 493 ntBASIC18.43■□□□□ 0.54
GGPS1O95749 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GGPS1O95749 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GGPS1O95749 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GGPS1O95749 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
GGPS1O95749 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GGPS1O95749 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms