Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.7□□□□□ -0.06
CNOT4O95628 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CNOT4O95628 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 AL391256.1-201ENST00000443260 1855 ntBASIC14.69□□□□□ -0.06
CNOT4O95628 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 PCDHB17P-201ENST00000539533 2393 ntBASIC14.69□□□□□ -0.06
CNOT4O95628 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CNOT4O95628 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.69□□□□□ -0.06
CNOT4O95628 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.69□□□□□ -0.06
CNOT4O95628 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.69□□□□□ -0.06
CNOT4O95628 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CNOT4O95628 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.69□□□□□ -0.06
CNOT4O95628 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.69□□□□□ -0.06
CNOT4O95628 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.69□□□□□ -0.06
CNOT4O95628 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 TFAMP1-201ENST00000412727 736 ntBASIC14.69□□□□□ -0.06
CNOT4O95628 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.69□□□□□ -0.06
CNOT4O95628 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.69□□□□□ -0.06
CNOT4O95628 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 SPDYE11-202ENST00000450699 704 ntBASIC14.69□□□□□ -0.06
CNOT4O95628 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.69□□□□□ -0.06
CNOT4O95628 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.69□□□□□ -0.06
CNOT4O95628 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.69□□□□□ -0.06
CNOT4O95628 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.69□□□□□ -0.06
CNOT4O95628 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.69□□□□□ -0.06
CNOT4O95628 SPDYE9P-201ENST00000570642 692 ntBASIC14.69□□□□□ -0.06
CNOT4O95628 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.69□□□□□ -0.06
CNOT4O95628 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 AC004835.2-201ENST00000603762 682 ntBASIC14.69□□□□□ -0.06
CNOT4O95628 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 SPDYE10P-202ENST00000612005 668 ntBASIC14.69□□□□□ -0.06
CNOT4O95628 SPDYE8P-202ENST00000612377 668 ntBASIC14.69□□□□□ -0.06
CNOT4O95628 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.69□□□□□ -0.06
CNOT4O95628 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.69□□□□□ -0.06
CNOT4O95628 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.69□□□□□ -0.06
CNOT4O95628 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CNOT4O95628 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.69□□□□□ -0.06
CNOT4O95628 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CNOT4O95628 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.69□□□□□ -0.06
CNOT4O95628 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.69□□□□□ -0.06
CNOT4O95628 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 NKILA-202ENST00000614771 2598 ntBASIC14.69□□□□□ -0.06
CNOT4O95628 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.69□□□□□ -0.06
CNOT4O95628 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CNOT4O95628 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNOT4O95628 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNOT4O95628 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.68□□□□□ -0.06
CNOT4O95628 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNOT4O95628 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNOT4O95628 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.68□□□□□ -0.06
CNOT4O95628 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNOT4O95628 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNOT4O95628 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNOT4O95628 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNOT4O95628 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CNOT4O95628 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.68□□□□□ -0.06
CNOT4O95628 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.68□□□□□ -0.06
CNOT4O95628 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.68□□□□□ -0.06
CNOT4O95628 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNOT4O95628 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNOT4O95628 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CNOT4O95628 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.68□□□□□ -0.06
CNOT4O95628 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CNOT4O95628 TSEN15P1-201ENST00000423257 515 ntBASIC14.68□□□□□ -0.06
CNOT4O95628 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.68□□□□□ -0.06
CNOT4O95628 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.68□□□□□ -0.06
CNOT4O95628 KRT8P23-201ENST00000560090 1207 ntBASIC14.68□□□□□ -0.06
CNOT4O95628 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.68□□□□□ -0.06
CNOT4O95628 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.68□□□□□ -0.06
CNOT4O95628 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNOT4O95628 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.68□□□□□ -0.06
CNOT4O95628 AC027612.4-201ENST00000605371 583 ntBASIC14.68□□□□□ -0.06
CNOT4O95628 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.68□□□□□ -0.06
CNOT4O95628 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.68□□□□□ -0.06
CNOT4O95628 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.68□□□□□ -0.06
CNOT4O95628 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.68□□□□□ -0.06
CNOT4O95628 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNOT4O95628 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.68□□□□□ -0.06
CNOT4O95628 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNOT4O95628 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms