Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.4□□□□□ -0.1
UPK1BO75841 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1BO75841 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.4□□□□□ -0.1
UPK1BO75841 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.4□□□□□ -0.1
UPK1BO75841 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1BO75841 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC14.4□□□□□ -0.1
UPK1BO75841 AC024563.2-201ENST00000603282 481 ntBASIC14.4□□□□□ -0.1
UPK1BO75841 AC087623.3-201ENST00000607047 1098 ntBASIC14.4□□□□□ -0.1
UPK1BO75841 AC024243.1-201ENST00000609234 778 ntBASIC14.4□□□□□ -0.1
UPK1BO75841 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.4□□□□□ -0.1
UPK1BO75841 AL023803.3-201ENST00000615559 522 ntBASIC14.4□□□□□ -0.1
UPK1BO75841 PCDHA3-202ENST00000532566 4594 ntBASIC14.4□□□□□ -0.1
UPK1BO75841 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
UPK1BO75841 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1BO75841 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1BO75841 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.4□□□□□ -0.1
UPK1BO75841 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
UPK1BO75841 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.4□□□□□ -0.1
UPK1BO75841 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.4□□□□□ -0.1
UPK1BO75841 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.4□□□□□ -0.1
UPK1BO75841 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.4□□□□□ -0.1
UPK1BO75841 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1BO75841 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1BO75841 AL031731.1-201ENST00000642131 2094 ntBASIC14.4□□□□□ -0.1
UPK1BO75841 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1BO75841 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1BO75841 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1BO75841 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
UPK1BO75841 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1BO75841 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1BO75841 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
UPK1BO75841 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.39□□□□□ -0.11
UPK1BO75841 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
UPK1BO75841 FGD5P1-202ENST00000614866 2498 ntBASIC14.39□□□□□ -0.11
UPK1BO75841 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.39□□□□□ -0.11
UPK1BO75841 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
UPK1BO75841 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.39□□□□□ -0.11
UPK1BO75841 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.39□□□□□ -0.11
UPK1BO75841 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.39□□□□□ -0.11
UPK1BO75841 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.39□□□□□ -0.11
UPK1BO75841 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
UPK1BO75841 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
UPK1BO75841 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 AL353719.1-201ENST00000566847 864 ntBASIC14.39□□□□□ -0.11
UPK1BO75841 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 AC080038.1-201ENST00000611274 1154 ntBASIC14.39□□□□□ -0.11
UPK1BO75841 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.39□□□□□ -0.11
UPK1BO75841 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.39□□□□□ -0.11
UPK1BO75841 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
UPK1BO75841 AC092865.7-201ENST00000641832 219 ntBASIC14.39□□□□□ -0.11
UPK1BO75841 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.39□□□□□ -0.11
UPK1BO75841 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
UPK1BO75841 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
UPK1BO75841 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 CICP20-201ENST00000443330 2801 ntBASIC14.39□□□□□ -0.11
UPK1BO75841 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
UPK1BO75841 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
UPK1BO75841 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
UPK1BO75841 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
UPK1BO75841 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1BO75841 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1BO75841 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
UPK1BO75841 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1BO75841 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1BO75841 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
UPK1BO75841 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1BO75841 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1BO75841 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1BO75841 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.38□□□□□ -0.11
UPK1BO75841 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1BO75841 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
UPK1BO75841 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.38□□□□□ -0.11
UPK1BO75841 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.38□□□□□ -0.11
UPK1BO75841 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
UPK1BO75841 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1BO75841 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.38□□□□□ -0.11
UPK1BO75841 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
UPK1BO75841 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1BO75841 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms