Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.93□□□□□ -0.34
ZNF253O75346 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF253O75346 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.93□□□□□ -0.34
ZNF253O75346 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF253O75346 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF253O75346 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF253O75346 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.92□□□□□ -0.34
ZNF253O75346 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC12.92□□□□□ -0.34
ZNF253O75346 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 AL009178.2-201ENST00000597278 2719 ntBASIC12.92□□□□□ -0.34
ZNF253O75346 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.92□□□□□ -0.34
ZNF253O75346 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.92□□□□□ -0.34
ZNF253O75346 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.92□□□□□ -0.34
ZNF253O75346 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
ZNF253O75346 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.92□□□□□ -0.34
ZNF253O75346 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 AP002414.1-201ENST00000391405 1147 ntBASIC12.92□□□□□ -0.34
ZNF253O75346 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
ZNF253O75346 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ZNF253O75346 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.92□□□□□ -0.34
ZNF253O75346 NUS1P1-201ENST00000446295 882 ntBASIC12.92□□□□□ -0.34
ZNF253O75346 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC12.92□□□□□ -0.34
ZNF253O75346 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.92□□□□□ -0.34
ZNF253O75346 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.92□□□□□ -0.34
ZNF253O75346 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
ZNF253O75346 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC12.92□□□□□ -0.34
ZNF253O75346 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
ZNF253O75346 SIGLEC16-201ENST00000599858 1437 ntBASIC12.92□□□□□ -0.34
ZNF253O75346 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.92□□□□□ -0.34
ZNF253O75346 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
ZNF253O75346 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.92□□□□□ -0.34
ZNF253O75346 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.92□□□□□ -0.34
ZNF253O75346 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.92□□□□□ -0.34
ZNF253O75346 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF253O75346 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
ZNF253O75346 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
ZNF253O75346 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.91□□□□□ -0.34
ZNF253O75346 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.91□□□□□ -0.34
ZNF253O75346 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.91□□□□□ -0.34
ZNF253O75346 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.91□□□□□ -0.34
ZNF253O75346 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.91□□□□□ -0.34
ZNF253O75346 AC006538.1-201ENST00000567905 1585 ntBASIC12.91□□□□□ -0.34
ZNF253O75346 MTHFR-217ENST00000641820 1569 ntBASIC12.91□□□□□ -0.34
ZNF253O75346 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
ZNF253O75346 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.91□□□□□ -0.34
ZNF253O75346 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ZNF253O75346 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ZNF253O75346 SPDYE21P-201ENST00000413323 827 ntBASIC12.91□□□□□ -0.34
ZNF253O75346 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC12.91□□□□□ -0.34
ZNF253O75346 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 CDV3-207ENST00000508481 661 ntTSL 3 BASIC12.91□□□□□ -0.34
ZNF253O75346 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.91□□□□□ -0.34
ZNF253O75346 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ZNF253O75346 AC013467.2-201ENST00000605472 835 ntBASIC12.91□□□□□ -0.34
ZNF253O75346 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.91□□□□□ -0.34
ZNF253O75346 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC12.91□□□□□ -0.34
ZNF253O75346 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF253O75346 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.91□□□□□ -0.34
ZNF253O75346 AC233702.3-201ENST00000578656 1387 ntBASIC12.91□□□□□ -0.34
ZNF253O75346 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ZNF253O75346 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms